Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HTTP42858 AC024941.1-201ENST00000612250 334 ntBASIC5.83□□□□□ -1.48
HTTP42858 CR381572.2-201ENST00000624852 397 ntBASIC5.83□□□□□ -1.48
HTTP42858 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HTTP42858 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HTTP42858 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.82□□□□□ -1.48
HTTP42858 TXNL1-201ENST00000217515 6894 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.82□□□□□ -1.48
HTTP42858 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC5.82□□□□□ -1.48
HTTP42858 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 PPIP5K1-201ENST00000334933 5586 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.82□□□□□ -1.48
HTTP42858 MRPS21P2-201ENST00000424704 264 ntBASIC5.82□□□□□ -1.48
HTTP42858 AC006967.1-201ENST00000467608 589 ntBASIC5.82□□□□□ -1.48
HTTP42858 AC010618.1-201ENST00000469924 477 ntBASIC5.82□□□□□ -1.48
HTTP42858 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.82□□□□□ -1.48
HTTP42858 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.82□□□□□ -1.48
HTTP42858 AC079414.3-201ENST00000612986 1090 ntBASIC5.82□□□□□ -1.48
HTTP42858 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.82□□□□□ -1.48
HTTP42858 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HTTP42858 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HTTP42858 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC5.82□□□□□ -1.48
HTTP42858 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 SCARNA20.4-201ENST00000516969 131 ntBASIC5.82□□□□□ -1.48
HTTP42858 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.82□□□□□ -1.48
HTTP42858 EGFR-201ENST00000275493 9821 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.82□□□□□ -1.48
HTTP42858 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HTTP42858 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.82□□□□□ -1.48
HTTP42858 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HTTP42858 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 ZNF652P1-201ENST00000442420 1309 ntBASIC5.81□□□□□ -1.48
HTTP42858 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.81□□□□□ -1.48
HTTP42858 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HTTP42858 RNA5SP28-201ENST00000363841 119 ntBASIC5.81□□□□□ -1.48
HTTP42858 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
HTTP42858 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.81□□□□□ -1.48
HTTP42858 AURKAPS2-201ENST00000454983 333 ntBASIC5.81□□□□□ -1.48
HTTP42858 AL356390.1-201ENST00000455684 397 ntBASIC5.81□□□□□ -1.48
HTTP42858 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.81□□□□□ -1.48
HTTP42858 AC093227.2-201ENST00000589357 285 ntBASIC5.81□□□□□ -1.48
HTTP42858 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.81□□□□□ -1.48
HTTP42858 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.81□□□□□ -1.48
HTTP42858 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HTTP42858 AL391262.1-201ENST00000556558 1992 ntBASIC5.81□□□□□ -1.48
HTTP42858 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HTTP42858 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HTTP42858 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HTTP42858 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.81□□□□□ -1.48
HTTP42858 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.81□□□□□ -1.48
HTTP42858 PMS2P3-207ENST00000529061 717 ntBASIC5.81□□□□□ -1.48
HTTP42858 COL11A1-202ENST00000358392 7327 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HTTP42858 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.81□□□□□ -1.48
HTTP42858 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
HTTP42858 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.81□□□□□ -1.48
HTTP42858 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.81□□□□□ -1.48
HTTP42858 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HTTP42858 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HTTP42858 GPS2P1-201ENST00000411761 986 ntBASIC5.81□□□□□ -1.48
HTTP42858 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.81□□□□□ -1.48
HTTP42858 SNORA84-201ENST00000459229 133 ntBASIC5.81□□□□□ -1.48
HTTP42858 RNU1-88P-201ENST00000459274 128 ntBASIC5.81□□□□□ -1.48
HTTP42858 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.81□□□□□ -1.48
HTTP42858 AL139041.1-201ENST00000605480 610 ntBASIC5.81□□□□□ -1.48
HTTP42858 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.81□□□□□ -1.48
HTTP42858 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HTTP42858 MAPK10-338ENST00000641647 3362 ntBASIC5.8□□□□□ -1.48
HTTP42858 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
HTTP42858 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HTTP42858 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms