Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
RFC3P40938 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.3□□□□□ -1.56
RFC3P40938 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.3□□□□□ -1.56
RFC3P40938 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.3□□□□□ -1.56
RFC3P40938 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.3□□□□□ -1.56
RFC3P40938 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.29□□□□□ -1.56
RFC3P40938 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RFC3P40938 THAP12P9-201ENST00000503971 2360 ntBASIC5.29□□□□□ -1.56
RFC3P40938 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RFC3P40938 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFC3P40938 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFC3P40938 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
RFC3P40938 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.29□□□□□ -1.56
RFC3P40938 SRRM1P3-201ENST00000426911 2678 ntBASIC5.29□□□□□ -1.56
RFC3P40938 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RFC3P40938 MRRFP1-201ENST00000435941 1675 ntBASIC5.29□□□□□ -1.56
RFC3P40938 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFC3P40938 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RFC3P40938 SNORA5.1-201ENST00000384275 131 ntBASIC5.29□□□□□ -1.56
RFC3P40938 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.29□□□□□ -1.56
RFC3P40938 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.29□□□□□ -1.56
RFC3P40938 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.29□□□□□ -1.56
RFC3P40938 AC016027.5-201ENST00000427227 210 ntBASIC5.29□□□□□ -1.56
RFC3P40938 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RFC3P40938 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.29□□□□□ -1.56
RFC3P40938 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.29□□□□□ -1.56
RFC3P40938 CUBNP2-201ENST00000443534 1139 ntBASIC5.29□□□□□ -1.56
RFC3P40938 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.29□□□□□ -1.56
RFC3P40938 NPM1P19-201ENST00000450070 712 ntBASIC5.29□□□□□ -1.56
RFC3P40938 EIF3LP3-201ENST00000495197 822 ntBASIC5.29□□□□□ -1.56
RFC3P40938 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.29□□□□□ -1.56
RFC3P40938 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFC3P40938 MIR2117-201ENST00000516780 80 ntBASIC5.29□□□□□ -1.56
RFC3P40938 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.29□□□□□ -1.56
RFC3P40938 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.29□□□□□ -1.56
RFC3P40938 HMGB1P42-201ENST00000532126 553 ntBASIC5.29□□□□□ -1.56
RFC3P40938 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.29□□□□□ -1.56
RFC3P40938 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFC3P40938 AC090651.1-201ENST00000567865 634 ntBASIC5.29□□□□□ -1.56
RFC3P40938 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.29□□□□□ -1.56
RFC3P40938 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFC3P40938 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.29□□□□□ -1.56
RFC3P40938 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.29□□□□□ -1.56
RFC3P40938 AC104695.2-201ENST00000605056 775 ntBASIC5.29□□□□□ -1.56
RFC3P40938 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.29□□□□□ -1.56
RFC3P40938 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.29□□□□□ -1.56
RFC3P40938 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFC3P40938 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFC3P40938 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFC3P40938 RARSP1-201ENST00000542842 1418 ntBASIC5.29□□□□□ -1.56
RFC3P40938 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.29□□□□□ -1.56
RFC3P40938 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFC3P40938 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RFC3P40938 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.29□□□□□ -1.56
RFC3P40938 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.29□□□□□ -1.56
RFC3P40938 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC3P40938 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.28□□□□□ -1.56
RFC3P40938 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC3P40938 AC022164.1-201ENST00000568767 2673 ntBASIC5.28□□□□□ -1.56
RFC3P40938 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC3P40938 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RFC3P40938 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC3P40938 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC3P40938 AL121835.1-201ENST00000404250 354 ntBASIC5.28□□□□□ -1.56
RFC3P40938 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.28□□□□□ -1.56
RFC3P40938 OR6E1P-201ENST00000414424 923 ntBASIC5.28□□□□□ -1.56
RFC3P40938 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.28□□□□□ -1.56
RFC3P40938 AL121776.1-201ENST00000429337 372 ntBASIC5.28□□□□□ -1.56
RFC3P40938 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.28□□□□□ -1.56
RFC3P40938 AL136455.1-201ENST00000441083 1240 ntBASIC5.28□□□□□ -1.56
RFC3P40938 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFC3P40938 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.28□□□□□ -1.56
RFC3P40938 RN7SL72P-201ENST00000460697 269 ntBASIC5.28□□□□□ -1.56
RFC3P40938 OR7E157P-201ENST00000494376 911 ntBASIC5.28□□□□□ -1.56
RFC3P40938 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.28□□□□□ -1.56
RFC3P40938 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.28□□□□□ -1.56
RFC3P40938 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.28□□□□□ -1.56
RFC3P40938 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RFC3P40938 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.28□□□□□ -1.56
RFC3P40938 OR4A42P-201ENST00000531397 938 ntBASIC5.28□□□□□ -1.56
RFC3P40938 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.28□□□□□ -1.56
RFC3P40938 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.28□□□□□ -1.56
RFC3P40938 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
RFC3P40938 AC090286.3-201ENST00000573133 187 ntBASIC5.28□□□□□ -1.56
RFC3P40938 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.28□□□□□ -1.56
RFC3P40938 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.28□□□□□ -1.56
RFC3P40938 FO393422.1-201ENST00000603908 708 ntBASIC5.28□□□□□ -1.56
RFC3P40938 AC022467.1-201ENST00000614738 749 ntBASIC5.28□□□□□ -1.56
RFC3P40938 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.28□□□□□ -1.56
RFC3P40938 AL445670.1-201ENST00000618889 801 ntBASIC5.28□□□□□ -1.56
RFC3P40938 AL390318.1-201ENST00000624564 687 ntBASIC5.28□□□□□ -1.56
RFC3P40938 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC3P40938 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC3P40938 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms