Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CLIP1P30622 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CLIP1P30622 AL034549.2-201ENST00000618285 3373 ntBASIC8.75□□□□□ -1.01
CLIP1P30622 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
CLIP1P30622 AC005294.1-201ENST00000355509 281 ntBASIC8.75□□□□□ -1.01
CLIP1P30622 RNA5SP514-201ENST00000363717 111 ntBASIC8.75□□□□□ -1.01
CLIP1P30622 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC8.75□□□□□ -1.01
CLIP1P30622 RN7SKP125-201ENST00000410481 302 ntBASIC8.75□□□□□ -1.01
CLIP1P30622 RPL7P6-201ENST00000480903 738 ntBASIC8.75□□□□□ -1.01
CLIP1P30622 RPL15P21-201ENST00000495592 567 ntBASIC8.75□□□□□ -1.01
CLIP1P30622 MTND6P2-201ENST00000512226 524 ntBASIC8.75□□□□□ -1.01
CLIP1P30622 RN7SKP67-201ENST00000515905 235 ntBASIC8.75□□□□□ -1.01
CLIP1P30622 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CLIP1P30622 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC8.75□□□□□ -1.01
CLIP1P30622 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CLIP1P30622 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CLIP1P30622 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
CLIP1P30622 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CLIP1P30622 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
CLIP1P30622 AL731532.1-201ENST00000623972 4236 ntBASIC8.75□□□□□ -1.01
CLIP1P30622 ZNF658B-201ENST00000602828 3408 ntBASIC8.74□□□□□ -1.01
CLIP1P30622 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC8.74□□□□□ -1.01
CLIP1P30622 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC8.74□□□□□ -1.01
CLIP1P30622 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CLIP1P30622 RN7SKP213-201ENST00000410746 298 ntBASIC8.74□□□□□ -1.01
CLIP1P30622 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.74□□□□□ -1.01
CLIP1P30622 AL672138.1-201ENST00000450604 1015 ntBASIC8.74□□□□□ -1.01
CLIP1P30622 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC8.74□□□□□ -1.01
CLIP1P30622 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.74□□□□□ -1.01
CLIP1P30622 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC8.74□□□□□ -1.01
CLIP1P30622 AP005403.1-201ENST00000579720 229 ntBASIC8.74□□□□□ -1.01
CLIP1P30622 H3F3BP2-201ENST00000583907 357 ntBASIC8.74□□□□□ -1.01
CLIP1P30622 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC8.74□□□□□ -1.01
CLIP1P30622 AP001267.4-201ENST00000602598 545 ntBASIC8.74□□□□□ -1.01
CLIP1P30622 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.74□□□□□ -1.01
CLIP1P30622 AC126915.2-201ENST00000610957 190 ntBASIC8.74□□□□□ -1.01
CLIP1P30622 MIR6798-201ENST00000612887 67 ntBASIC8.74□□□□□ -1.01
CLIP1P30622 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC8.74□□□□□ -1.01
CLIP1P30622 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
CLIP1P30622 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CLIP1P30622 AC073365.1-203ENST00000641055 1992 ntBASIC8.74□□□□□ -1.01
CLIP1P30622 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CLIP1P30622 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
CLIP1P30622 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.74□□□□□ -1.01
CLIP1P30622 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CLIP1P30622 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
CLIP1P30622 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CLIP1P30622 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
CLIP1P30622 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
CLIP1P30622 DBIP1-201ENST00000401435 260 ntBASIC8.73□□□□□ -1.01
CLIP1P30622 AL133270.1-201ENST00000402635 279 ntBASIC8.73□□□□□ -1.01
CLIP1P30622 OR4K12P-201ENST00000406538 961 ntBASIC8.73□□□□□ -1.01
CLIP1P30622 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.73□□□□□ -1.01
CLIP1P30622 PPP2R2DP1-201ENST00000420526 637 ntBASIC8.73□□□□□ -1.01
CLIP1P30622 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.73□□□□□ -1.01
CLIP1P30622 RPSAP50-201ENST00000481955 852 ntBASIC8.73□□□□□ -1.01
CLIP1P30622 RN7SL447P-201ENST00000494711 245 ntBASIC8.73□□□□□ -1.01
CLIP1P30622 RN7SKP99-201ENST00000517028 307 ntBASIC8.73□□□□□ -1.01
CLIP1P30622 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC8.73□□□□□ -1.01
CLIP1P30622 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC8.73□□□□□ -1.01
CLIP1P30622 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
CLIP1P30622 RPL10P14-201ENST00000565265 298 ntBASIC8.73□□□□□ -1.01
CLIP1P30622 AC106730.2-201ENST00000566641 540 ntBASIC8.73□□□□□ -1.01
CLIP1P30622 TAS2R6P-201ENST00000605022 826 ntBASIC8.73□□□□□ -1.01
CLIP1P30622 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC8.73□□□□□ -1.01
CLIP1P30622 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
CLIP1P30622 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CLIP1P30622 SELE-205ENST00000367777 3576 ntTSL 5 BASIC8.73□□□□□ -1.01
CLIP1P30622 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
CLIP1P30622 AL117339.4-201ENST00000608335 7063 ntBASIC8.73□□□□□ -1.01
CLIP1P30622 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
CLIP1P30622 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CLIP1P30622 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CLIP1P30622 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CLIP1P30622 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CLIP1P30622 AL133388.1-201ENST00000404509 287 ntBASIC8.72□□□□□ -1.01
CLIP1P30622 RIMKLBP2-201ENST00000424737 654 ntBASIC8.72□□□□□ -1.01
CLIP1P30622 AC005033.1-201ENST00000428904 813 ntBASIC8.72□□□□□ -1.01
CLIP1P30622 RPL7AP6-201ENST00000477943 801 ntBASIC8.72□□□□□ -1.01
CLIP1P30622 RN7SL808P-201ENST00000496066 299 ntBASIC8.72□□□□□ -1.01
CLIP1P30622 AC072052.1-201ENST00000496556 306 ntBASIC8.72□□□□□ -1.01
CLIP1P30622 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC8.72□□□□□ -1.01
CLIP1P30622 RNU6-941P-201ENST00000516346 108 ntBASIC8.72□□□□□ -1.01
CLIP1P30622 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC8.72□□□□□ -1.01
CLIP1P30622 AC022832.1-201ENST00000530718 645 ntBASIC8.72□□□□□ -1.01
CLIP1P30622 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC8.72□□□□□ -1.01
CLIP1P30622 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC8.72□□□□□ -1.01
CLIP1P30622 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CLIP1P30622 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
CLIP1P30622 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CLIP1P30622 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC8.72□□□□□ -1.01
CLIP1P30622 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC8.72□□□□□ -1.01
CLIP1P30622 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.72□□□□□ -1.01
CLIP1P30622 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
CLIP1P30622 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
CLIP1P30622 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC8.71□□□□□ -1.01
CLIP1P30622 RPL12P3-201ENST00000440080 396 ntBASIC8.71□□□□□ -1.01
CLIP1P30622 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC8.71□□□□□ -1.01
CLIP1P30622 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC8.71□□□□□ -1.01
CLIP1P30622 BX284632.1-201ENST00000478218 541 ntBASIC8.71□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms