Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.2□□□□□ -1.58
SHC1P29353 AC084824.2-201ENST00000548906 345 ntBASIC5.2□□□□□ -1.58
SHC1P29353 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.2□□□□□ -1.58
SHC1P29353 AC096996.1-201ENST00000563813 325 ntBASIC5.2□□□□□ -1.58
SHC1P29353 AC007066.2-202ENST00000566531 914 ntBASIC5.2□□□□□ -1.58
SHC1P29353 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.2□□□□□ -1.58
SHC1P29353 AL163952.1-202ENST00000569625 600 ntBASIC5.2□□□□□ -1.58
SHC1P29353 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.2□□□□□ -1.58
SHC1P29353 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.2□□□□□ -1.58
SHC1P29353 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.2□□□□□ -1.58
SHC1P29353 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHC1P29353 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.2□□□□□ -1.58
SHC1P29353 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.2□□□□□ -1.58
SHC1P29353 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.2□□□□□ -1.58
SHC1P29353 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHC1P29353 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.2□□□□□ -1.58
SHC1P29353 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.2□□□□□ -1.58
SHC1P29353 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SHC1P29353 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHC1P29353 AP001284.1-201ENST00000528393 2118 ntBASIC5.2□□□□□ -1.58
SHC1P29353 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHC1P29353 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SHC1P29353 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SHC1P29353 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.19□□□□□ -1.58
SHC1P29353 AC007342.9-201ENST00000623877 1385 ntBASIC5.19□□□□□ -1.58
SHC1P29353 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHC1P29353 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
SHC1P29353 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHC1P29353 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHC1P29353 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHC1P29353 AC023490.2-201ENST00000359859 470 ntBASIC5.19□□□□□ -1.58
SHC1P29353 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SHC1P29353 HMGB1P20-201ENST00000402555 677 ntBASIC5.19□□□□□ -1.58
SHC1P29353 RN7SKP279-201ENST00000411383 298 ntBASIC5.19□□□□□ -1.58
SHC1P29353 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.19□□□□□ -1.58
SHC1P29353 AC117434.1-201ENST00000419971 836 ntBASIC5.19□□□□□ -1.58
SHC1P29353 AC006455.6-201ENST00000426192 893 ntBASIC5.19□□□□□ -1.58
SHC1P29353 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.19□□□□□ -1.58
SHC1P29353 HMGB3P24-201ENST00000433260 622 ntBASIC5.19□□□□□ -1.58
SHC1P29353 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.19□□□□□ -1.58
SHC1P29353 AC023271.1-201ENST00000445936 1090 ntBASIC5.19□□□□□ -1.58
SHC1P29353 RNU1-88P-201ENST00000459274 128 ntBASIC5.19□□□□□ -1.58
SHC1P29353 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.19□□□□□ -1.58
SHC1P29353 OR7E157P-201ENST00000494376 911 ntBASIC5.19□□□□□ -1.58
SHC1P29353 NENFP3-201ENST00000503735 313 ntBASIC5.19□□□□□ -1.58
SHC1P29353 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.19□□□□□ -1.58
SHC1P29353 AC090568.1-201ENST00000509499 856 ntBASIC5.19□□□□□ -1.58
SHC1P29353 SCARNA6.1-201ENST00000516989 238 ntBASIC5.19□□□□□ -1.58
SHC1P29353 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.19□□□□□ -1.58
SHC1P29353 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.19□□□□□ -1.58
SHC1P29353 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.19□□□□□ -1.58
SHC1P29353 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.19□□□□□ -1.58
SHC1P29353 DPPA2P4-201ENST00000563717 878 ntBASIC5.19□□□□□ -1.58
SHC1P29353 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.19□□□□□ -1.58
SHC1P29353 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.19□□□□□ -1.58
SHC1P29353 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.19□□□□□ -1.58
SHC1P29353 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.19□□□□□ -1.58
SHC1P29353 AL136370.1-201ENST00000608166 691 ntBASIC5.19□□□□□ -1.58
SHC1P29353 AL354950.1-201ENST00000614150 568 ntBASIC5.19□□□□□ -1.58
SHC1P29353 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.19□□□□□ -1.58
SHC1P29353 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHC1P29353 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHC1P29353 AC106872.5-201ENST00000508856 1416 ntBASIC5.19□□□□□ -1.58
SHC1P29353 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.19□□□□□ -1.58
SHC1P29353 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHC1P29353 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
SHC1P29353 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.19□□□□□ -1.58
SHC1P29353 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.19□□□□□ -1.58
SHC1P29353 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.19□□□□□ -1.58
SHC1P29353 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.19□□□□□ -1.58
SHC1P29353 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHC1P29353 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHC1P29353 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHC1P29353 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHC1P29353 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SHC1P29353 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHC1P29353 SNORA64.1-201ENST00000362600 132 ntBASIC5.18□□□□□ -1.58
SHC1P29353 RNA5SP394-201ENST00000364216 119 ntBASIC5.18□□□□□ -1.58
SHC1P29353 RN7SKP292-201ENST00000365522 317 ntBASIC5.18□□□□□ -1.58
SHC1P29353 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHC1P29353 SNORA5.1-201ENST00000384275 131 ntBASIC5.18□□□□□ -1.58
SHC1P29353 RNA5SP91-201ENST00000390902 119 ntBASIC5.18□□□□□ -1.58
SHC1P29353 RPL11P3-201ENST00000395256 523 ntBASIC5.18□□□□□ -1.58
SHC1P29353 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.18□□□□□ -1.58
SHC1P29353 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.18□□□□□ -1.58
SHC1P29353 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.18□□□□□ -1.58
SHC1P29353 AK4P4-201ENST00000419465 646 ntBASIC5.18□□□□□ -1.58
SHC1P29353 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.18□□□□□ -1.58
SHC1P29353 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SHC1P29353 MTND6P12-201ENST00000428247 522 ntBASIC5.18□□□□□ -1.58
SHC1P29353 AC090602.1-201ENST00000469695 252 ntBASIC5.18□□□□□ -1.58
SHC1P29353 AC007998.1-201ENST00000474156 672 ntBASIC5.18□□□□□ -1.58
SHC1P29353 RPS17P15-201ENST00000475609 349 ntBASIC5.18□□□□□ -1.58
SHC1P29353 DUTP1-201ENST00000493631 470 ntBASIC5.18□□□□□ -1.58
SHC1P29353 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.18□□□□□ -1.58
SHC1P29353 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.18□□□□□ -1.58
SHC1P29353 SNORA48.9-201ENST00000516419 162 ntBASIC5.18□□□□□ -1.58
SHC1P29353 RNU6-362P-201ENST00000516736 90 ntBASIC5.18□□□□□ -1.58
SHC1P29353 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.18□□□□□ -1.58
SHC1P29353 AC021733.2-201ENST00000518830 497 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms