Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AL355974.3-201ENST00000617383 467 ntBASIC6.64□□□□□ -1.35
POLR2AP24928 AC091905.4-201ENST00000623432 202 ntBASIC6.64□□□□□ -1.35
POLR2AP24928 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.64□□□□□ -1.35
POLR2AP24928 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.64□□□□□ -1.35
POLR2AP24928 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
POLR2AP24928 LINC01616-201ENST00000561816 2280 ntBASIC6.64□□□□□ -1.35
POLR2AP24928 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.64□□□□□ -1.35
POLR2AP24928 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
POLR2AP24928 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
POLR2AP24928 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.63□□□□□ -1.35
POLR2AP24928 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
POLR2AP24928 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.63□□□□□ -1.35
POLR2AP24928 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
POLR2AP24928 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
POLR2AP24928 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
POLR2AP24928 RNVU1-6-201ENST00000364688 164 ntBASIC6.63□□□□□ -1.35
POLR2AP24928 SNORA72.3-201ENST00000365074 132 ntBASIC6.63□□□□□ -1.35
POLR2AP24928 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
POLR2AP24928 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.63□□□□□ -1.35
POLR2AP24928 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.63□□□□□ -1.35
POLR2AP24928 AL133325.1-201ENST00000421090 382 ntBASIC6.63□□□□□ -1.35
POLR2AP24928 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.63□□□□□ -1.35
POLR2AP24928 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.63□□□□□ -1.35
POLR2AP24928 RPL17P35-201ENST00000432217 549 ntBASIC6.63□□□□□ -1.35
POLR2AP24928 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.63□□□□□ -1.35
POLR2AP24928 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.63□□□□□ -1.35
POLR2AP24928 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.63□□□□□ -1.35
POLR2AP24928 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.63□□□□□ -1.35
POLR2AP24928 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.63□□□□□ -1.35
POLR2AP24928 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.63□□□□□ -1.35
POLR2AP24928 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.63□□□□□ -1.35
POLR2AP24928 IGLV3-24-201ENST00000517477 197 ntBASIC6.63□□□□□ -1.35
POLR2AP24928 TPM3P3-201ENST00000521343 354 ntBASIC6.63□□□□□ -1.35
POLR2AP24928 AF230666.2-201ENST00000602328 725 ntBASIC6.63□□□□□ -1.35
POLR2AP24928 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.63□□□□□ -1.35
POLR2AP24928 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.63□□□□□ -1.35
POLR2AP24928 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.63□□□□□ -1.35
POLR2AP24928 NCOA4P3-201ENST00000513203 1877 ntBASIC6.63□□□□□ -1.35
POLR2AP24928 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
POLR2AP24928 MFSD8-239ENST00000641590 2479 ntBASIC6.63□□□□□ -1.35
POLR2AP24928 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
POLR2AP24928 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
POLR2AP24928 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.63□□□□□ -1.35
POLR2AP24928 AL445523.1-201ENST00000451184 1362 ntBASIC6.63□□□□□ -1.35
POLR2AP24928 THAP12P9-201ENST00000503971 2360 ntBASIC6.63□□□□□ -1.35
POLR2AP24928 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
POLR2AP24928 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.62□□□□□ -1.35
POLR2AP24928 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.62□□□□□ -1.35
POLR2AP24928 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
POLR2AP24928 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.62□□□□□ -1.35
POLR2AP24928 RNU1-149P-201ENST00000390870 161 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 RN7SKP279-201ENST00000411383 298 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.62□□□□□ -1.35
POLR2AP24928 AC015977.1-201ENST00000418887 292 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.62□□□□□ -1.35
POLR2AP24928 AC092647.2-201ENST00000452998 253 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.62□□□□□ -1.35
POLR2AP24928 ABCA11P-202ENST00000504019 2110 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.62□□□□□ -1.35
POLR2AP24928 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.62□□□□□ -1.35
POLR2AP24928 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.62□□□□□ -1.35
POLR2AP24928 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
POLR2AP24928 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.62□□□□□ -1.35
POLR2AP24928 AC139697.1-201ENST00000548429 745 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.62□□□□□ -1.35
POLR2AP24928 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.62□□□□□ -1.35
POLR2AP24928 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
POLR2AP24928 AC008745.1-201ENST00000604064 271 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 AP000770.2-201ENST00000623694 100 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 AC008993.2-201ENST00000631744 806 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
POLR2AP24928 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.62□□□□□ -1.35
POLR2AP24928 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.62□□□□□ -1.35
POLR2AP24928 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.62□□□□□ -1.35
POLR2AP24928 CASC19-221ENST00000641309 1382 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC6.62□□□□□ -1.35
POLR2AP24928 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
POLR2AP24928 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 ZNF101P1-201ENST00000435701 1720 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.62□□□□□ -1.35
POLR2AP24928 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
POLR2AP24928 RNA5SP305-201ENST00000362665 119 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.62□□□□□ -1.35
POLR2AP24928 AC211486.3-201ENST00000412694 621 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 AL360081.1-201ENST00000428299 555 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 MTCYBP11-201ENST00000447254 1109 ntBASIC6.62□□□□□ -1.35
POLR2AP24928 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms