Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC107398.1-201ENST00000486904 505 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NFKB1P19838 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC7.32□□□□□ -1.24
NFKB1P19838 CHCHD2P7-201ENST00000508008 452 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 ATP1B1P1-201ENST00000509767 915 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 PGAM4P2-201ENST00000512491 721 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 MAST4-IT1-201ENST00000514241 658 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 AC023632.1-201ENST00000518463 375 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7.32□□□□□ -1.24
NFKB1P19838 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC7.32□□□□□ -1.24
NFKB1P19838 GLYATL1P4-201ENST00000529326 906 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.32□□□□□ -1.24
NFKB1P19838 AC044913.1-201ENST00000557200 430 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 NDUFA3P4-201ENST00000560814 250 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 MIR4528-201ENST00000577763 90 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 RN7SL667P-201ENST00000582817 298 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 RPSAP66-201ENST00000592196 606 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 AC090578.1-201ENST00000604955 591 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.32□□□□□ -1.24
NFKB1P19838 AP000238.1-201ENST00000608759 426 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.32□□□□□ -1.24
NFKB1P19838 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC7.32□□□□□ -1.24
NFKB1P19838 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.32□□□□□ -1.24
NFKB1P19838 AC073488.7-201ENST00000633785 778 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 MTCO1P25-201ENST00000414449 1799 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NFKB1P19838 AC125238.2-201ENST00000430003 1440 ntBASIC7.32□□□□□ -1.24
NFKB1P19838 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
NFKB1P19838 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NFKB1P19838 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.32□□□□□ -1.24
NFKB1P19838 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.32□□□□□ -1.24
NFKB1P19838 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
NFKB1P19838 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.32□□□□□ -1.24
NFKB1P19838 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NFKB1P19838 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
NFKB1P19838 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NFKB1P19838 BX322650.1-201ENST00000332359 2143 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.31□□□□□ -1.24
NFKB1P19838 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NFKB1P19838 KYNUP2-201ENST00000582280 1329 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
NFKB1P19838 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NFKB1P19838 TEX21P-201ENST00000447107 1476 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NFKB1P19838 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NFKB1P19838 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.31□□□□□ -1.24
NFKB1P19838 AC009135.2-201ENST00000624136 1768 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 AP003175.1-201ENST00000641383 6658 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NFKB1P19838 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
NFKB1P19838 OR11H13P-201ENST00000359695 979 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
NFKB1P19838 Y_RNA.582-201ENST00000391023 95 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.31□□□□□ -1.24
NFKB1P19838 AC010385.1-201ENST00000412374 256 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.31□□□□□ -1.24
NFKB1P19838 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.31□□□□□ -1.24
NFKB1P19838 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC7.31□□□□□ -1.24
NFKB1P19838 GSTA6P-201ENST00000424144 582 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 AC073900.1-201ENST00000429766 776 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC7.31□□□□□ -1.24
NFKB1P19838 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC7.31□□□□□ -1.24
NFKB1P19838 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC7.31□□□□□ -1.24
NFKB1P19838 MTND1P28-201ENST00000435623 950 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 AL161626.1-201ENST00000441480 490 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 USP9YP8-201ENST00000441913 500 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 AL157827.1-201ENST00000447622 132 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC7.31□□□□□ -1.24
NFKB1P19838 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NFKB1P19838 AC008620.1-201ENST00000468453 592 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.31□□□□□ -1.24
NFKB1P19838 RPL9P6-201ENST00000492764 598 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC7.31□□□□□ -1.24
NFKB1P19838 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC7.31□□□□□ -1.24
NFKB1P19838 AC008628.2-201ENST00000502605 298 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.31□□□□□ -1.24
NFKB1P19838 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC7.31□□□□□ -1.24
NFKB1P19838 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
NFKB1P19838 AC096661.1-201ENST00000515870 822 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC7.31□□□□□ -1.24
NFKB1P19838 PDCL3P1-201ENST00000534575 734 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 AC124947.2-202ENST00000552735 133 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
NFKB1P19838 RN7SL366P-201ENST00000577957 292 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 OR4K7P-201ENST00000580232 945 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC7.31□□□□□ -1.24
NFKB1P19838 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.31□□□□□ -1.24
NFKB1P19838 AP000860.1-201ENST00000605250 559 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 AC011374.2-201ENST00000607135 526 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 AL354760.1-201ENST00000608357 643 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 uc_338.37-201ENST00000620113 186 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 AC078909.2-201ENST00000620584 398 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NFKB1P19838 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.31□□□□□ -1.24
NFKB1P19838 MIR3688-2-201ENST00000636963 87 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 CASC19-232ENST00000641480 1244 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 LINC01739-205ENST00000641890 573 ntBASIC7.31□□□□□ -1.24
NFKB1P19838 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.31□□□□□ -1.24
NFKB1P19838 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms