Protein–RNA interactions for Protein: P19387

POLR2C, DNA-directed RNA polymerase II subunit RPB3, humanhuman

Predicted RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2CP19387 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2CP19387 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2CP19387 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2CP19387 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2CP19387 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
POLR2CP19387 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.7□□□□□ -1.5
POLR2CP19387 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.7□□□□□ -1.5
POLR2CP19387 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.7□□□□□ -1.5
POLR2CP19387 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.7□□□□□ -1.5
POLR2CP19387 Z85994.2-201ENST00000434327 452 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.7□□□□□ -1.5
POLR2CP19387 AL663074.2-201ENST00000440621 479 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 PFN1P6-201ENST00000476786 399 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2CP19387 GAPDHP71-201ENST00000511530 1003 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 RN7SKP5-201ENST00000517045 272 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 AC026688.1-201ENST00000520639 1168 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.7□□□□□ -1.5
POLR2CP19387 AP000648.1-201ENST00000529682 397 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.7□□□□□ -1.5
POLR2CP19387 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.7□□□□□ -1.5
POLR2CP19387 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.7□□□□□ -1.5
POLR2CP19387 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.7□□□□□ -1.5
POLR2CP19387 TMF1P1-201ENST00000576058 373 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
POLR2CP19387 MIR3614-201ENST00000581261 86 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.7□□□□□ -1.5
POLR2CP19387 AP001267.4-201ENST00000602598 545 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 AL031601.1-201ENST00000605702 394 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 AL139099.4-201ENST00000614802 114 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2CP19387 AP005431.1-201ENST00000618479 319 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 AC000095.2-202ENST00000637415 154 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 OR11H2-202ENST00000641517 1085 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2CP19387 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2CP19387 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2CP19387 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.7□□□□□ -1.5
POLR2CP19387 OR9K1P-202ENST00000641111 3217 ntBASIC5.7□□□□□ -1.5
POLR2CP19387 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2CP19387 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2CP19387 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.7□□□□□ -1.5
POLR2CP19387 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.7□□□□□ -1.5
POLR2CP19387 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
POLR2CP19387 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
POLR2CP19387 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
POLR2CP19387 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.69□□□□□ -1.5
POLR2CP19387 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
POLR2CP19387 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 RNA5SP500-201ENST00000364486 119 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
POLR2CP19387 RPL23AP19-201ENST00000436229 369 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 RPS12P17-201ENST00000438591 377 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 AC114878.1-201ENST00000441166 358 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.69□□□□□ -1.5
POLR2CP19387 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.69□□□□□ -1.5
POLR2CP19387 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.69□□□□□ -1.5
POLR2CP19387 AL356390.1-201ENST00000455684 397 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 AC093166.4-201ENST00000457867 318 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 HMGN1P8-201ENST00000463578 288 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.69□□□□□ -1.5
POLR2CP19387 AC007998.1-201ENST00000474156 672 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 AC099521.1-201ENST00000482557 334 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 COL6A4P2-205ENST00000509855 506 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.69□□□□□ -1.5
POLR2CP19387 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.69□□□□□ -1.5
POLR2CP19387 FTH1P11-201ENST00000517577 551 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.69□□□□□ -1.5
POLR2CP19387 OR4A42P-201ENST00000531397 938 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 AC079600.1-201ENST00000550326 297 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 AC011270.1-201ENST00000558606 583 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.69□□□□□ -1.5
POLR2CP19387 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.69□□□□□ -1.5
POLR2CP19387 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.69□□□□□ -1.5
POLR2CP19387 RPL21P136-201ENST00000605378 396 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 AC145423.1-201ENST00000605712 336 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.69□□□□□ -1.5
POLR2CP19387 AC004808.2-201ENST00000627965 773 ntBASIC5.69□□□□□ -1.5
POLR2CP19387 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.69□□□□□ -1.5
POLR2CP19387 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
POLR2CP19387 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2CP19387 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
POLR2CP19387 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
POLR2CP19387 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms