Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SUMO2P15-201ENST00000604285 278 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 AC093388.1-201ENST00000609166 430 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 MIR193BHG-214ENST00000641765 509 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
FREM3P0C091 PABPC1P6-201ENST00000445594 1829 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.05□□□□□ -1.6
FREM3P0C091 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.05□□□□□ -1.6
FREM3P0C091 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
FREM3P0C091 AC104581.5-201ENST00000624171 7141 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FREM3P0C091 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.05□□□□□ -1.6
FREM3P0C091 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FREM3P0C091 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FREM3P0C091 MARK2P4-201ENST00000503381 2380 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.05□□□□□ -1.6
FREM3P0C091 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FREM3P0C091 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FREM3P0C091 RNU1-136P-201ENST00000384181 164 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
FREM3P0C091 AL133388.1-201ENST00000404509 287 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.05□□□□□ -1.6
FREM3P0C091 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.05□□□□□ -1.6
FREM3P0C091 AL450996.1-201ENST00000445574 1202 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 IGBP1P3-201ENST00000447449 1000 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.05□□□□□ -1.6
FREM3P0C091 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.05□□□□□ -1.6
FREM3P0C091 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.05□□□□□ -1.6
FREM3P0C091 RBM22P12-201ENST00000567098 1255 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.05□□□□□ -1.6
FREM3P0C091 AP000769.2-201ENST00000602344 396 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 HIRAP1-201ENST00000605318 787 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 AC079395.2-201ENST00000610982 737 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.05□□□□□ -1.6
FREM3P0C091 MIR6133-201ENST00000617057 108 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 AC010480.1-201ENST00000624823 684 ntBASIC5.05□□□□□ -1.6
FREM3P0C091 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
FREM3P0C091 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FREM3P0C091 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FREM3P0C091 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FREM3P0C091 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FREM3P0C091 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FREM3P0C091 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FREM3P0C091 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FREM3P0C091 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.04□□□□□ -1.6
FREM3P0C091 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FREM3P0C091 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.04□□□□□ -1.6
FREM3P0C091 RPL7P58-201ENST00000402913 758 ntBASIC5.04□□□□□ -1.6
FREM3P0C091 AL357752.1-201ENST00000412817 349 ntBASIC5.04□□□□□ -1.6
FREM3P0C091 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.04□□□□□ -1.6
FREM3P0C091 RN7SL583P-201ENST00000475692 287 ntBASIC5.04□□□□□ -1.6
FREM3P0C091 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.04□□□□□ -1.6
FREM3P0C091 AL121594.2-201ENST00000541658 472 ntBASIC5.04□□□□□ -1.6
FREM3P0C091 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FREM3P0C091 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.04□□□□□ -1.6
FREM3P0C091 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.04□□□□□ -1.6
FREM3P0C091 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.04□□□□□ -1.6
FREM3P0C091 AL512624.1-201ENST00000613638 469 ntBASIC5.04□□□□□ -1.6
FREM3P0C091 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.04□□□□□ -1.6
FREM3P0C091 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
FREM3P0C091 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
FREM3P0C091 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.04□□□□□ -1.6
FREM3P0C091 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
FREM3P0C091 MT-RNR2-201ENST00000387347 1559 ntBASIC5.04□□□□□ -1.6
FREM3P0C091 AL590763.1-201ENST00000398297 1545 ntBASIC5.04□□□□□ -1.6
FREM3P0C091 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FREM3P0C091 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.04□□□□□ -1.6
FREM3P0C091 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.04□□□□□ -1.6
FREM3P0C091 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FREM3P0C091 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FREM3P0C091 RNA5SP183-201ENST00000362452 119 ntBASIC5.03□□□□□ -1.6
FREM3P0C091 MIR937-201ENST00000401271 86 ntBASIC5.03□□□□□ -1.6
FREM3P0C091 OR4K12P-201ENST00000406538 961 ntBASIC5.03□□□□□ -1.6
FREM3P0C091 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FREM3P0C091 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.03□□□□□ -1.6
FREM3P0C091 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.03□□□□□ -1.6
FREM3P0C091 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.03□□□□□ -1.6
FREM3P0C091 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.03□□□□□ -1.6
FREM3P0C091 AC245047.2-201ENST00000441060 530 ntBASIC5.03□□□□□ -1.6
FREM3P0C091 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FREM3P0C091 AL133445.1-201ENST00000467051 452 ntBASIC5.03□□□□□ -1.6
FREM3P0C091 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.03□□□□□ -1.6
FREM3P0C091 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.03□□□□□ -1.6
FREM3P0C091 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.03□□□□□ -1.6
FREM3P0C091 CDC42P3-201ENST00000518493 633 ntBASIC5.03□□□□□ -1.6
FREM3P0C091 AC004825.1-201ENST00000555068 586 ntBASIC5.03□□□□□ -1.6
FREM3P0C091 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.03□□□□□ -1.6
FREM3P0C091 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.03□□□□□ -1.6
FREM3P0C091 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FREM3P0C091 AC000095.2-202ENST00000637415 154 ntBASIC5.03□□□□□ -1.6
FREM3P0C091 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
FREM3P0C091 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FREM3P0C091 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FREM3P0C091 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.03□□□□□ -1.6
FREM3P0C091 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FREM3P0C091 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.03□□□□□ -1.6
FREM3P0C091 RN7SKP278-201ENST00000410504 342 ntBASIC5.03□□□□□ -1.6
FREM3P0C091 RN7SKP17-201ENST00000411242 351 ntBASIC5.03□□□□□ -1.6
FREM3P0C091 GTF3AP1-201ENST00000416942 1004 ntBASIC5.03□□□□□ -1.6
FREM3P0C091 GAPDHP25-201ENST00000447061 1001 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms