Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CTSDP07339 AL596266.1-201ENST00000448132 400 ntBASIC4.65□□□□□ -1.67
CTSDP07339 HMGB1P7-201ENST00000450921 612 ntBASIC4.65□□□□□ -1.67
CTSDP07339 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC4.65□□□□□ -1.67
CTSDP07339 AC005165.2-201ENST00000466070 380 ntBASIC4.65□□□□□ -1.67
CTSDP07339 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.65□□□□□ -1.67
CTSDP07339 RN7SKP183-201ENST00000517169 324 ntBASIC4.65□□□□□ -1.67
CTSDP07339 IGLV3-24-201ENST00000517477 197 ntBASIC4.65□□□□□ -1.67
CTSDP07339 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.65□□□□□ -1.67
CTSDP07339 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.65□□□□□ -1.67
CTSDP07339 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.65□□□□□ -1.67
CTSDP07339 AC127024.5-201ENST00000580085 462 ntBASIC4.65□□□□□ -1.67
CTSDP07339 AP005119.1-201ENST00000580956 292 ntBASIC4.65□□□□□ -1.67
CTSDP07339 MIR4260-201ENST00000583107 67 ntBASIC4.65□□□□□ -1.67
CTSDP07339 H3F3BP2-201ENST00000583907 357 ntBASIC4.65□□□□□ -1.67
CTSDP07339 AC068768.2-201ENST00000602352 343 ntBASIC4.65□□□□□ -1.67
CTSDP07339 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.65□□□□□ -1.67
CTSDP07339 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CTSDP07339 AL357140.4-201ENST00000636827 412 ntBASIC4.65□□□□□ -1.67
CTSDP07339 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CTSDP07339 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CTSDP07339 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.65□□□□□ -1.67
CTSDP07339 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CTSDP07339 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CTSDP07339 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.64□□□□□ -1.67
CTSDP07339 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CTSDP07339 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.64□□□□□ -1.67
CTSDP07339 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.64□□□□□ -1.67
CTSDP07339 AC008627.1-201ENST00000517511 1704 ntBASIC4.64□□□□□ -1.67
CTSDP07339 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
CTSDP07339 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.64□□□□□ -1.67
CTSDP07339 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTSDP07339 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTSDP07339 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CTSDP07339 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTSDP07339 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CTSDP07339 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.64□□□□□ -1.67
CTSDP07339 RN7SKP29-201ENST00000410957 272 ntBASIC4.64□□□□□ -1.67
CTSDP07339 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.64□□□□□ -1.67
CTSDP07339 AL035422.1-201ENST00000414193 397 ntBASIC4.64□□□□□ -1.67
CTSDP07339 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.64□□□□□ -1.67
CTSDP07339 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.64□□□□□ -1.67
CTSDP07339 HSPD1P12-201ENST00000429127 1069 ntBASIC4.64□□□□□ -1.67
CTSDP07339 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.64□□□□□ -1.67
CTSDP07339 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.64□□□□□ -1.67
CTSDP07339 AC007679.3-201ENST00000434035 414 ntBASIC4.64□□□□□ -1.67
CTSDP07339 AL353662.1-201ENST00000439099 327 ntBASIC4.64□□□□□ -1.67
CTSDP07339 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.64□□□□□ -1.67
CTSDP07339 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.64□□□□□ -1.67
CTSDP07339 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.64□□□□□ -1.67
CTSDP07339 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTSDP07339 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.64□□□□□ -1.67
CTSDP07339 AC021006.1-201ENST00000489849 553 ntBASIC4.64□□□□□ -1.67
CTSDP07339 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTSDP07339 AC016559.2-201ENST00000510759 359 ntBASIC4.64□□□□□ -1.67
CTSDP07339 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.64□□□□□ -1.67
CTSDP07339 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.64□□□□□ -1.67
CTSDP07339 AC009879.1-201ENST00000520029 839 ntBASIC4.64□□□□□ -1.67
CTSDP07339 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.64□□□□□ -1.67
CTSDP07339 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.64□□□□□ -1.67
CTSDP07339 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.64□□□□□ -1.67
CTSDP07339 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.64□□□□□ -1.67
CTSDP07339 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.64□□□□□ -1.67
CTSDP07339 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.64□□□□□ -1.67
CTSDP07339 MIR4502-201ENST00000580432 81 ntBASIC4.64□□□□□ -1.67
CTSDP07339 MIR4311-201ENST00000580794 100 ntBASIC4.64□□□□□ -1.67
CTSDP07339 AC005244.1-201ENST00000582566 339 ntBASIC4.64□□□□□ -1.67
CTSDP07339 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.64□□□□□ -1.67
CTSDP07339 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.64□□□□□ -1.67
CTSDP07339 AL049840.6-201ENST00000604583 345 ntBASIC4.64□□□□□ -1.67
CTSDP07339 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.64□□□□□ -1.67
CTSDP07339 MIR6780B-201ENST00000610307 79 ntBASIC4.64□□□□□ -1.67
CTSDP07339 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTSDP07339 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
CTSDP07339 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTSDP07339 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTSDP07339 AC100757.1-201ENST00000616872 1835 ntBASIC4.64□□□□□ -1.67
CTSDP07339 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTSDP07339 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.64□□□□□ -1.67
CTSDP07339 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTSDP07339 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.64□□□□□ -1.67
CTSDP07339 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTSDP07339 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTSDP07339 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.63□□□□□ -1.67
CTSDP07339 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTSDP07339 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.63□□□□□ -1.67
CTSDP07339 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTSDP07339 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTSDP07339 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CTSDP07339 QRSL1P1-201ENST00000400977 1540 ntBASIC4.63□□□□□ -1.67
CTSDP07339 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTSDP07339 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTSDP07339 OR1L6-202ENST00000373684 1044 ntBASIC4.63□□□□□ -1.67
CTSDP07339 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.63□□□□□ -1.67
CTSDP07339 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.63□□□□□ -1.67
CTSDP07339 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.63□□□□□ -1.67
CTSDP07339 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.63□□□□□ -1.67
CTSDP07339 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.63□□□□□ -1.67
CTSDP07339 AL354893.1-201ENST00000433735 348 ntBASIC4.63□□□□□ -1.67
CTSDP07339 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms