Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC6.49□□□□□ -1.37
COL2A1P02458 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
COL2A1P02458 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
COL2A1P02458 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.49□□□□□ -1.37
COL2A1P02458 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL2A1P02458 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
COL2A1P02458 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.48□□□□□ -1.37
COL2A1P02458 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.48□□□□□ -1.37
COL2A1P02458 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.48□□□□□ -1.37
COL2A1P02458 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.48□□□□□ -1.37
COL2A1P02458 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL2A1P02458 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.48□□□□□ -1.37
COL2A1P02458 AL772161.1-201ENST00000439130 476 ntBASIC6.48□□□□□ -1.37
COL2A1P02458 GAPDHP25-201ENST00000447061 1001 ntBASIC6.48□□□□□ -1.37
COL2A1P02458 SNORD125-201ENST00000459538 96 ntBASIC6.48□□□□□ -1.37
COL2A1P02458 AC090142.2-201ENST00000483263 416 ntBASIC6.48□□□□□ -1.37
COL2A1P02458 RPL15P21-201ENST00000495592 567 ntBASIC6.48□□□□□ -1.37
COL2A1P02458 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL2A1P02458 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.48□□□□□ -1.37
COL2A1P02458 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.48□□□□□ -1.37
COL2A1P02458 RNU6-941P-201ENST00000516346 108 ntBASIC6.48□□□□□ -1.37
COL2A1P02458 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.48□□□□□ -1.37
COL2A1P02458 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.48□□□□□ -1.37
COL2A1P02458 OR5AM1P-201ENST00000532136 1032 ntBASIC6.48□□□□□ -1.37
COL2A1P02458 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.48□□□□□ -1.37
COL2A1P02458 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.48□□□□□ -1.37
COL2A1P02458 NPM1P42-201ENST00000560329 862 ntBASIC6.48□□□□□ -1.37
COL2A1P02458 RPL10P14-201ENST00000565265 298 ntBASIC6.48□□□□□ -1.37
COL2A1P02458 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL2A1P02458 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.48□□□□□ -1.37
COL2A1P02458 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.48□□□□□ -1.37
COL2A1P02458 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL2A1P02458 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL2A1P02458 AL117339.4-201ENST00000608335 7063 ntBASIC6.48□□□□□ -1.37
COL2A1P02458 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
COL2A1P02458 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.48□□□□□ -1.37
COL2A1P02458 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL2A1P02458 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL2A1P02458 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL2A1P02458 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL2A1P02458 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL2A1P02458 AC079753.1-201ENST00000623243 3868 ntBASIC6.48□□□□□ -1.37
COL2A1P02458 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL2A1P02458 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.48□□□□□ -1.37
COL2A1P02458 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
COL2A1P02458 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
COL2A1P02458 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL2A1P02458 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL2A1P02458 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
COL2A1P02458 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.47□□□□□ -1.37
COL2A1P02458 OR10T1P-201ENST00000424327 947 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.47□□□□□ -1.37
COL2A1P02458 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.47□□□□□ -1.37
COL2A1P02458 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.47□□□□□ -1.37
COL2A1P02458 AC009220.1-201ENST00000451614 275 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 AC093267.1-201ENST00000489176 961 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 AC147055.3-201ENST00000510547 851 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.47□□□□□ -1.37
COL2A1P02458 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.47□□□□□ -1.37
COL2A1P02458 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.47□□□□□ -1.37
COL2A1P02458 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.47□□□□□ -1.37
COL2A1P02458 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.47□□□□□ -1.37
COL2A1P02458 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.47□□□□□ -1.37
COL2A1P02458 MIR378J-201ENST00000611988 109 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.47□□□□□ -1.37
COL2A1P02458 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
COL2A1P02458 AC068733.2-201ENST00000605434 1418 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL2A1P02458 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.47□□□□□ -1.37
COL2A1P02458 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL2A1P02458 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.47□□□□□ -1.37
COL2A1P02458 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL2A1P02458 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.47□□□□□ -1.37
COL2A1P02458 OR55B1P-203ENST00000641518 2602 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 AC092070.2-203ENST00000598377 3644 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL2A1P02458 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL2A1P02458 OR4F13P-202ENST00000560066 2054 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.47□□□□□ -1.37
COL2A1P02458 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL2A1P02458 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC6.47□□□□□ -1.37
COL2A1P02458 AC018765.1-201ENST00000623357 3446 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
COL2A1P02458 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
COL2A1P02458 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL2A1P02458 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL2A1P02458 RNU1-149P-201ENST00000390870 161 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.47□□□□□ -1.37
COL2A1P02458 RIMKLBP2-201ENST00000424737 654 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 FAM96AP1-201ENST00000430879 482 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 RPL12P17-201ENST00000432393 498 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 Z80107.2-201ENST00000445127 392 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.47□□□□□ -1.37
COL2A1P02458 RN7SKP248-201ENST00000516278 305 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.47□□□□□ -1.37
COL2A1P02458 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.47□□□□□ -1.37
COL2A1P02458 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.47□□□□□ -1.37
COL2A1P02458 AC106730.2-201ENST00000566641 540 ntBASIC6.47□□□□□ -1.37
COL2A1P02458 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
COL2A1P02458 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms