Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.47□□□□□ -1.53
TNFP01375 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.47□□□□□ -1.53
TNFP01375 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TNFP01375 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TNFP01375 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TNFP01375 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.47□□□□□ -1.53
TNFP01375 Z95114.1-201ENST00000624264 14574 ntBASIC5.47□□□□□ -1.53
TNFP01375 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
TNFP01375 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TNFP01375 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TNFP01375 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TNFP01375 CCAT2-201ENST00000630920 1752 ntBASIC5.47□□□□□ -1.53
TNFP01375 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.47□□□□□ -1.53
TNFP01375 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
TNFP01375 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.47□□□□□ -1.53
TNFP01375 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
TNFP01375 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFP01375 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.46□□□□□ -1.54
TNFP01375 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.46□□□□□ -1.54
TNFP01375 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFP01375 AL451142.1-201ENST00000375867 775 ntBASIC5.46□□□□□ -1.54
TNFP01375 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFP01375 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TNFP01375 RN7SKP278-201ENST00000410504 342 ntBASIC5.46□□□□□ -1.54
TNFP01375 GABARAPL3-201ENST00000412799 354 ntBASIC5.46□□□□□ -1.54
TNFP01375 BMS1P13-201ENST00000417301 885 ntBASIC5.46□□□□□ -1.54
TNFP01375 USP24P1-201ENST00000433802 779 ntBASIC5.46□□□□□ -1.54
TNFP01375 CYCSP6-201ENST00000434498 302 ntBASIC5.46□□□□□ -1.54
TNFP01375 AL627308.1-201ENST00000435693 821 ntBASIC5.46□□□□□ -1.54
TNFP01375 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.46□□□□□ -1.54
TNFP01375 AL596266.1-201ENST00000448132 400 ntBASIC5.46□□□□□ -1.54
TNFP01375 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.46□□□□□ -1.54
TNFP01375 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFP01375 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFP01375 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.46□□□□□ -1.54
TNFP01375 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.46□□□□□ -1.54
TNFP01375 AL049779.2-201ENST00000553847 315 ntBASIC5.46□□□□□ -1.54
TNFP01375 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFP01375 AC051619.2-201ENST00000559063 397 ntBASIC5.46□□□□□ -1.54
TNFP01375 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFP01375 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.46□□□□□ -1.54
TNFP01375 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFP01375 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.46□□□□□ -1.54
TNFP01375 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.46□□□□□ -1.54
TNFP01375 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.46□□□□□ -1.54
TNFP01375 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.46□□□□□ -1.54
TNFP01375 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.46□□□□□ -1.54
TNFP01375 AC025470.1-201ENST00000510053 2032 ntBASIC5.46□□□□□ -1.54
TNFP01375 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFP01375 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TNFP01375 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TNFP01375 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFP01375 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFP01375 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TNFP01375 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TNFP01375 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 AL592429.1-201ENST00000403909 1473 ntBASIC5.45□□□□□ -1.54
TNFP01375 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
TNFP01375 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TNFP01375 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TNFP01375 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 RNU1-136P-201ENST00000384181 164 ntBASIC5.45□□□□□ -1.54
TNFP01375 RNU1-77P-201ENST00000390868 162 ntBASIC5.45□□□□□ -1.54
TNFP01375 RPL7P58-201ENST00000402913 758 ntBASIC5.45□□□□□ -1.54
TNFP01375 AC096921.1-201ENST00000411661 375 ntBASIC5.45□□□□□ -1.54
TNFP01375 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFP01375 BRWD1P3-201ENST00000428816 390 ntBASIC5.45□□□□□ -1.54
TNFP01375 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFP01375 LYPLA1P1-201ENST00000434514 622 ntBASIC5.45□□□□□ -1.54
TNFP01375 NANOGP9-201ENST00000439890 892 ntBASIC5.45□□□□□ -1.54
TNFP01375 RPL12P39-201ENST00000455456 496 ntBASIC5.45□□□□□ -1.54
TNFP01375 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFP01375 COPS8P2-201ENST00000473228 627 ntBASIC5.45□□□□□ -1.54
TNFP01375 ATP5LP5-201ENST00000483050 299 ntBASIC5.45□□□□□ -1.54
TNFP01375 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFP01375 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.45□□□□□ -1.54
TNFP01375 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFP01375 CDC42P3-201ENST00000518493 633 ntBASIC5.45□□□□□ -1.54
TNFP01375 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.45□□□□□ -1.54
TNFP01375 AL512329.2-201ENST00000607350 548 ntBASIC5.45□□□□□ -1.54
TNFP01375 AC000068.2-201ENST00000608816 460 ntBASIC5.45□□□□□ -1.54
TNFP01375 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFP01375 AC136428.4-201ENST00000634254 1155 ntBASIC5.45□□□□□ -1.54
TNFP01375 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFP01375 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 AC034229.2-201ENST00000566945 2508 ntBASIC5.45□□□□□ -1.54
TNFP01375 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
TNFP01375 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 AL162456.1-201ENST00000634535 2006 ntBASIC5.45□□□□□ -1.54
TNFP01375 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.45□□□□□ -1.54
TNFP01375 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TNFP01375 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms