Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN2BO60939 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN2BO60939 LYARP1-201ENST00000436977 1501 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 AC005005.4-201ENST00000623789 16698 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN2BO60939 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN2BO60939 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN2BO60939 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SCN2BO60939 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCN2BO60939 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN2BO60939 RNA5SP477-201ENST00000362639 119 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SCN2BO60939 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SCN2BO60939 RNA5SP431-201ENST00000410312 120 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.34□□□□□ -1.55
SCN2BO60939 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN2BO60939 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.34□□□□□ -1.55
SCN2BO60939 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN2BO60939 AZGP1P2-201ENST00000454506 345 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN2BO60939 RPSAP51-201ENST00000497462 645 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN2BO60939 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN2BO60939 SNORA70.11-201ENST00000515987 138 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 SNORA70.13-201ENST00000516116 138 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 SCARNA6.1-201ENST00000516989 238 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN2BO60939 AC138832.1-201ENST00000522871 556 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN2BO60939 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SCN2BO60939 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.34□□□□□ -1.55
SCN2BO60939 AC079905.1-201ENST00000549280 475 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN2BO60939 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN2BO60939 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN2BO60939 AC090286.3-201ENST00000573133 187 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 MIR4260-201ENST00000583107 67 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.34□□□□□ -1.55
SCN2BO60939 AL139124.1-201ENST00000609123 421 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 AC021766.1-201ENST00000624404 741 ntBASIC5.34□□□□□ -1.55
SCN2BO60939 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCN2BO60939 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SCN2BO60939 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SCN2BO60939 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN2BO60939 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.34□□□□□ -1.55
SCN2BO60939 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SCN2BO60939 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SCN2BO60939 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.34□□□□□ -1.56
SCN2BO60939 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SCN2BO60939 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
SCN2BO60939 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN2BO60939 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SCN2BO60939 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SCN2BO60939 AC011503.2-201ENST00000594230 1500 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN2BO60939 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN2BO60939 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SCN2BO60939 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN2BO60939 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN2BO60939 NAMPTP1-201ENST00000440465 2514 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
SCN2BO60939 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN2BO60939 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN2BO60939 GAPDHP24-201ENST00000328713 983 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SCN2BO60939 TMSB4XP2-201ENST00000335179 210 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 RNA5SP30-201ENST00000365552 115 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN2BO60939 PEX12P1-201ENST00000400284 1048 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN2BO60939 PRUNEP1-201ENST00000425846 705 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 TMEM183AP1-205ENST00000432739 290 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 AC069154.1-201ENST00000432914 542 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN2BO60939 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN2BO60939 RN7SL168P-201ENST00000463821 279 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 ATP5LP5-201ENST00000483050 299 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 DUTP7-201ENST00000507982 486 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN2BO60939 Y_RNA.667-201ENST00000516212 107 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN2BO60939 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN2BO60939 AC006512.2-201ENST00000543250 486 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.33□□□□□ -1.56
SCN2BO60939 AC026826.3-201ENST00000561747 158 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 DPPA2P4-201ENST00000563717 878 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN2BO60939 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN2BO60939 AC010503.3-201ENST00000594355 540 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.33□□□□□ -1.56
SCN2BO60939 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN2BO60939 AC024884.1-201ENST00000620583 399 ntBASIC5.33□□□□□ -1.56
SCN2BO60939 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
SCN2BO60939 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN2BO60939 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN2BO60939 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
SCN2BO60939 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN2BO60939 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SCN2BO60939 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms