Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC128677.1-201ENST00000436016 442 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.6□□□□□ -1.51
SHOX2O60902 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.6□□□□□ -1.51
SHOX2O60902 CYCSP24-201ENST00000445119 316 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 RPS18P1-201ENST00000447840 458 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 RPS23P2-201ENST00000463671 415 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 RPS7P10-201ENST00000464254 603 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 AL591473.1-201ENST00000464297 313 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 AC023245.1-201ENST00000468501 517 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.6□□□□□ -1.51
SHOX2O60902 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.6□□□□□ -1.51
SHOX2O60902 HMGN1P9-201ENST00000515212 298 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 AC138938.1-201ENST00000515431 782 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 RNA5SP473-201ENST00000516402 125 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 SCARNA20.4-201ENST00000516969 131 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.6□□□□□ -1.51
SHOX2O60902 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.6□□□□□ -1.51
SHOX2O60902 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.6□□□□□ -1.51
SHOX2O60902 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.6□□□□□ -1.51
SHOX2O60902 PMS2P3-207ENST00000529061 717 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.6□□□□□ -1.51
SHOX2O60902 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.6□□□□□ -1.51
SHOX2O60902 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHOX2O60902 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.6□□□□□ -1.51
SHOX2O60902 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.6□□□□□ -1.51
SHOX2O60902 MIR212-201ENST00000586026 110 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 AC063977.7-201ENST00000594454 337 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.6□□□□□ -1.51
SHOX2O60902 AC015914.2-201ENST00000618167 288 ntBASIC5.6□□□□□ -1.51
SHOX2O60902 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHOX2O60902 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHOX2O60902 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SHOX2O60902 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHOX2O60902 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SHOX2O60902 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.59□□□□□ -1.51
SHOX2O60902 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SHOX2O60902 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHOX2O60902 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHOX2O60902 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.59□□□□□ -1.51
SHOX2O60902 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHOX2O60902 GVINP1-202ENST00000531871 7271 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHOX2O60902 RN7SKP77-201ENST00000363261 353 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.59□□□□□ -1.51
SHOX2O60902 SNORD56.6-201ENST00000384569 71 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 MIR191-201ENST00000384873 92 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 SNRPEP6-201ENST00000407465 277 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 NAP1L4P2-201ENST00000425958 899 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.59□□□□□ -1.51
SHOX2O60902 AL596266.1-201ENST00000448132 400 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.59□□□□□ -1.51
SHOX2O60902 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.59□□□□□ -1.51
SHOX2O60902 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.59□□□□□ -1.51
SHOX2O60902 RPS12P31-201ENST00000491419 398 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 RPL15P21-201ENST00000495592 567 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.59□□□□□ -1.51
SHOX2O60902 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.59□□□□□ -1.51
SHOX2O60902 NACAP5-201ENST00000509863 636 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.59□□□□□ -1.51
SHOX2O60902 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.59□□□□□ -1.51
SHOX2O60902 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHOX2O60902 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.59□□□□□ -1.51
SHOX2O60902 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHOX2O60902 AC025283.1-201ENST00000572039 734 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 MIR6862-1-201ENST00000613016 70 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 MIR6862-2-201ENST00000614755 70 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHOX2O60902 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHOX2O60902 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
SHOX2O60902 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.59□□□□□ -1.51
SHOX2O60902 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHOX2O60902 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
SHOX2O60902 AL449283.1-201ENST00000602631 3403 ntBASIC5.59□□□□□ -1.51
SHOX2O60902 GNL2P1-201ENST00000451274 2190 ntBASIC5.59□□□□□ -1.52
SHOX2O60902 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SHOX2O60902 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
SHOX2O60902 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.58□□□□□ -1.52
SHOX2O60902 RBPJP7-201ENST00000442803 1447 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SHOX2O60902 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SHOX2O60902 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.58□□□□□ -1.52
SHOX2O60902 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHOX2O60902 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHOX2O60902 RNA5SP279-201ENST00000365513 117 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHOX2O60902 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.58□□□□□ -1.52
SHOX2O60902 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.58□□□□□ -1.52
SHOX2O60902 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.58□□□□□ -1.52
SHOX2O60902 AL360013.1-201ENST00000419031 858 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 TRGV5P-201ENST00000419915 354 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 KIF4CP-201ENST00000422742 1279 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 OR5M12P-201ENST00000423388 929 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.58□□□□□ -1.52
SHOX2O60902 PSMD10P2-201ENST00000432890 672 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 AC010086.1-201ENST00000437359 1052 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.58□□□□□ -1.52
SHOX2O60902 SEPT14P12-201ENST00000442280 560 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms