Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CUX2O14529 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC9.57□□□□□ -0.88
CUX2O14529 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CUX2O14529 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CUX2O14529 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CUX2O14529 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
CUX2O14529 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC9.57□□□□□ -0.88
CUX2O14529 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CUX2O14529 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
CUX2O14529 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CUX2O14529 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
CUX2O14529 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC9.57□□□□□ -0.88
CUX2O14529 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
CUX2O14529 MIR134-201ENST00000385258 73 ntBASIC9.57□□□□□ -0.88
CUX2O14529 AP003170.5-201ENST00000397185 335 ntBASIC9.57□□□□□ -0.88
CUX2O14529 GAPDHP15-201ENST00000398586 975 ntBASIC9.57□□□□□ -0.88
CUX2O14529 TRGV7-201ENST00000427089 353 ntBASIC9.57□□□□□ -0.88
CUX2O14529 AC023141.8-201ENST00000442554 208 ntBASIC9.57□□□□□ -0.88
CUX2O14529 ACA64.4-201ENST00000459070 127 ntBASIC9.57□□□□□ -0.88
CUX2O14529 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC9.57□□□□□ -0.88
CUX2O14529 AC074255.1-201ENST00000511259 501 ntBASIC9.57□□□□□ -0.88
CUX2O14529 ASB8-204ENST00000536071 568 ntTSL 4 BASIC9.57□□□□□ -0.88
CUX2O14529 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC9.57□□□□□ -0.88
CUX2O14529 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC9.57□□□□□ -0.88
CUX2O14529 AC011487.3-201ENST00000593607 453 ntBASIC9.57□□□□□ -0.88
CUX2O14529 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC9.57□□□□□ -0.88
CUX2O14529 CDC42EP3P1-201ENST00000601004 764 ntBASIC9.57□□□□□ -0.88
CUX2O14529 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC9.57□□□□□ -0.88
CUX2O14529 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC9.57□□□□□ -0.88
CUX2O14529 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC9.57□□□□□ -0.88
CUX2O14529 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC9.57□□□□□ -0.88
CUX2O14529 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CUX2O14529 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC9.57□□□□□ -0.88
CUX2O14529 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
CUX2O14529 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
CUX2O14529 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
CUX2O14529 THAP12P9-201ENST00000503971 2360 ntBASIC9.56□□□□□ -0.88
CUX2O14529 BRD7P6-201ENST00000431406 1860 ntBASIC9.56□□□□□ -0.88
CUX2O14529 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CUX2O14529 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
CUX2O14529 RN7SKP95-201ENST00000362860 303 ntBASIC9.56□□□□□ -0.88
CUX2O14529 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CUX2O14529 CHIAP3-201ENST00000423668 1133 ntBASIC9.56□□□□□ -0.88
CUX2O14529 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC9.56□□□□□ -0.88
CUX2O14529 AL162739.1-201ENST00000450606 307 ntBASIC9.56□□□□□ -0.88
CUX2O14529 AURKAPS2-201ENST00000454983 333 ntBASIC9.56□□□□□ -0.88
CUX2O14529 AC020890.1-201ENST00000491837 504 ntBASIC9.56□□□□□ -0.88
CUX2O14529 AC023818.1-201ENST00000498379 384 ntBASIC9.56□□□□□ -0.88
CUX2O14529 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
CUX2O14529 RN7SKP99-201ENST00000517028 307 ntBASIC9.56□□□□□ -0.88
CUX2O14529 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
CUX2O14529 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC9.56□□□□□ -0.88
CUX2O14529 AC021006.3-201ENST00000530771 192 ntBASIC9.56□□□□□ -0.88
CUX2O14529 AC011497.2-201ENST00000600255 639 ntBASIC9.56□□□□□ -0.88
CUX2O14529 AL139041.1-201ENST00000605480 610 ntBASIC9.56□□□□□ -0.88
CUX2O14529 AL445423.1-201ENST00000609941 536 ntBASIC9.56□□□□□ -0.88
CUX2O14529 AC073575.2-201ENST00000614212 627 ntBASIC9.56□□□□□ -0.88
CUX2O14529 AL355974.3-201ENST00000617383 467 ntBASIC9.56□□□□□ -0.88
CUX2O14529 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CUX2O14529 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
CUX2O14529 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC9.56□□□□□ -0.88
CUX2O14529 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC9.56□□□□□ -0.88
CUX2O14529 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CUX2O14529 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC9.56□□□□□ -0.88
CUX2O14529 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC9.56□□□□□ -0.88
CUX2O14529 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 OR9G4-201ENST00000302957 984 ntBASIC9.55□□□□□ -0.88
CUX2O14529 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 NIFKP3-201ENST00000417799 865 ntBASIC9.55□□□□□ -0.88
CUX2O14529 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC9.55□□□□□ -0.88
CUX2O14529 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC9.55□□□□□ -0.88
CUX2O14529 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC9.55□□□□□ -0.88
CUX2O14529 AC009643.1-201ENST00000532030 391 ntBASIC9.55□□□□□ -0.88
CUX2O14529 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC9.55□□□□□ -0.88
CUX2O14529 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC9.55□□□□□ -0.88
CUX2O14529 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC9.55□□□□□ -0.88
CUX2O14529 AL683813.2-201ENST00000605245 502 ntBASIC9.55□□□□□ -0.88
CUX2O14529 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
CUX2O14529 OR52H1-202ENST00000641796 1061 ntBASIC9.55□□□□□ -0.88
CUX2O14529 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
CUX2O14529 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 OR55B1P-203ENST00000641518 2602 ntBASIC9.55□□□□□ -0.88
CUX2O14529 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
CUX2O14529 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CUX2O14529 AC009948.3-201ENST00000603415 1798 ntBASIC9.54□□□□□ -0.88
CUX2O14529 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CUX2O14529 RNA5SP332-201ENST00000391063 115 ntBASIC9.54□□□□□ -0.88
CUX2O14529 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC9.54□□□□□ -0.88
CUX2O14529 OR2AM1P-201ENST00000422137 422 ntBASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms