Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 RN7SKP162-201ENST00000363605 345 ntBASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 RN7SKP124-201ENST00000364730 341 ntBASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 HMGB3P24-201ENST00000433260 622 ntBASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC005297.1-201ENST00000444765 862 ntBASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 AL133445.1-201ENST00000467051 452 ntBASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 CYP4F27P-201ENST00000514557 494 ntBASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 SNORA70.11-201ENST00000515987 138 ntBASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 SNORA70.13-201ENST00000516116 138 ntBASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 HMGN2P47-201ENST00000559378 272 ntBASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC008536.1-201ENST00000602872 669 ntBASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC018690.1-201ENST00000608144 626 ntBASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC016590.3-201ENST00000611171 753 ntBASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC008115.3-201ENST00000614874 549 ntBASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
TMX2-CTNND1H3BSU7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 SNORA64.1-201ENST00000362600 132 ntBASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 RNA5SP211-201ENST00000365516 117 ntBASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC019205.1-201ENST00000421830 730 ntBASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 AL662874.1-201ENST00000426065 230 ntBASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 AL731534.1-201ENST00000434711 269 ntBASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC073410.1-201ENST00000435125 589 ntBASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 MED28P3-201ENST00000444288 531 ntBASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 DUTP7-201ENST00000507982 486 ntBASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 RNA5SP34-201ENST00000516887 130 ntBASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 NRBF2P4-201ENST00000520874 850 ntBASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 AL035661.1-201ENST00000620459 1144 ntBASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 CASC19-248ENST00000641674 1356 ntBASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 AP001157.1-201ENST00000550837 2339 ntBASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TMX2-CTNND1H3BSU7 AC011933.2-201ENST00000578539 2790 ntBASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 OR9K1P-201ENST00000326513 941 ntBASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 RN7SKP29-201ENST00000410957 272 ntBASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 MRPL53P1-201ENST00000414323 319 ntBASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 RPL5P25-201ENST00000441148 775 ntBASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 EEF1B2P6-201ENST00000445713 673 ntBASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 RPL7P39-201ENST00000481157 744 ntBASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 TOMM22P4-201ENST00000511318 336 ntBASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 SCARNA6.1-201ENST00000516989 238 ntBASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 DPPA3P2-202ENST00000557188 1219 ntBASIC5.61□□□□□ -1.51
TMX2-CTNND1H3BSU7 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms