Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 AP002373.2-201ENST00000541631 1060 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 AGGF1P9-201ENST00000561884 913 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC005332.4-201ENST00000592752 579 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC068620.3-201ENST00000602749 560 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC079610.2-201ENST00000604818 690 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC026790.2-201ENST00000606282 430 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC011472.4-201ENST00000615848 491 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 MIR6729-201ENST00000618194 65 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC024023.1-201ENST00000624530 922 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 CASC19-261ENST00000641853 1638 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 AC112243.1-201ENST00000623949 3851 ntBASIC5.83□□□□□ -1.48
LRFN1Q9P244 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
LRFN1Q9P244 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRFN1Q9P244 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LRFN1Q9P244 RBPJP2-201ENST00000618187 1444 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LRFN1Q9P244 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LRFN1Q9P244 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LRFN1Q9P244 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LRFN1Q9P244 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LRFN1Q9P244 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LRFN1Q9P244 RNU6-666P-201ENST00000363499 107 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LRFN1Q9P244 RNU6-354P-201ENST00000383862 107 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 RNU6-610P-201ENST00000384264 107 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 RNU6-1005P-201ENST00000384519 107 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 AL050335.1-201ENST00000396909 869 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 RN7SKP144-201ENST00000411108 279 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 RNA5SP498-201ENST00000411342 120 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 UBE2V1P11-201ENST00000411559 285 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 AC006994.1-201ENST00000438212 839 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 AMYP1-201ENST00000440059 1023 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 HMGB1P26-201ENST00000452520 628 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 Z83838.1-202ENST00000456225 839 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 RN7SL221P-201ENST00000466190 281 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 CBX1P5-201ENST00000475330 559 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 AC093801.2-201ENST00000503966 1050 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 IMPA1P1-201ENST00000510718 842 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 NPM1P35-201ENST00000533043 868 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 AC011374.2-201ENST00000607135 526 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 AC004801.6-201ENST00000616571 978 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 AC009269.6-201ENST00000621778 588 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 AC145207.9-201ENST00000623802 325 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 AC025809.2-201ENST00000625085 1802 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 AC005332.9-201ENST00000620266 2921 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 BIN2P1-201ENST00000504996 1530 ntBASIC5.82□□□□□ -1.48
LRFN1Q9P244 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LRFN1Q9P244 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.82□□□□□ -1.48
LRFN1Q9P244 AC073365.1-203ENST00000641055 1992 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms