Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 FAM27E4-201ENST00000605259 342 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AL138960.1-201ENST00000613838 513 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AC021422.1-201ENST00000621212 473 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 SNX18P3-202ENST00000565670 1750 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 AL158152.1-201ENST00000602652 1435 ntBASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
BLOC1S4Q9NUP1 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 AC007342.5-201ENST00000571340 2142 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 RNU1-136P-201ENST00000384181 164 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 RNU6-729P-201ENST00000384399 107 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 AC245060.4-201ENST00000413293 1121 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 VN1R21P-201ENST00000426703 765 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 MTCO1P57-201ENST00000432182 261 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 AP006222.1-205ENST00000450734 457 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 OR52E7P-201ENST00000452394 933 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 AC011476.1-201ENST00000466725 307 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 UBFD1P1-201ENST00000473259 814 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 AC139697.1-201ENST00000548429 745 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 ZNF322P1-201ENST00000568013 1209 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 AC005726.4-201ENST00000582858 458 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 AL365181.4-201ENST00000609800 547 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 AL356608.1-201ENST00000610034 820 ntBASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
BLOC1S4Q9NUP1 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
BLOC1S4Q9NUP1 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
BLOC1S4Q9NUP1 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
BLOC1S4Q9NUP1 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
BLOC1S4Q9NUP1 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.4□□□□□ -1.39
BLOC1S4Q9NUP1 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
BLOC1S4Q9NUP1 AC091305.2-201ENST00000624049 1576 ntBASIC6.4□□□□□ -1.39
BLOC1S4Q9NUP1 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
BLOC1S4Q9NUP1 AL022323.4-201ENST00000623980 13120 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 GTF2IP4-201ENST00000453092 2054 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AC083799.1-201ENST00000366451 910 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AL445213.1-201ENST00000412589 747 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 NENFP1-201ENST00000419476 466 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 ARAFP2-201ENST00000440565 559 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 ACA64.1-201ENST00000459171 127 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 RN7SL570P-201ENST00000484405 292 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 RPS7P6-201ENST00000485777 579 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 NENFP3-201ENST00000503735 313 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AC074255.1-201ENST00000511259 501 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 DHFRP1-201ENST00000579682 559 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AC015802.2-201ENST00000589690 189 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AC063977.5-201ENST00000601044 974 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 NANOGP3-201ENST00000605855 286 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AC012213.4-201ENST00000606457 354 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AL133406.3-201ENST00000606817 541 ntBASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
BLOC1S4Q9NUP1 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms