Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTNNBIP1Q9NSA3 AC022306.1-201ENST00000560489 1562 ntBASIC4.6□□□□□ -1.67
CTNNBIP1Q9NSA3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.6□□□□□ -1.67
CTNNBIP1Q9NSA3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.6□□□□□ -1.67
CTNNBIP1Q9NSA3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CTNNBIP1Q9NSA3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTNNBIP1Q9NSA3 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC4.6□□□□□ -1.67
CTNNBIP1Q9NSA3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.6□□□□□ -1.67
CTNNBIP1Q9NSA3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.6□□□□□ -1.67
CTNNBIP1Q9NSA3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.6□□□□□ -1.67
CTNNBIP1Q9NSA3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 QRSL1P1-201ENST00000400977 1540 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AL121878.1-201ENST00000418638 859 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 HSPD1P9-201ENST00000420325 1636 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 PTP4A1P1-201ENST00000420539 515 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 NPM1P22-201ENST00000427761 952 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AL022324.2-201ENST00000434827 780 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AL136455.1-201ENST00000441083 1240 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 RN7SL254P-201ENST00000460609 284 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 MTCO1P55-201ENST00000489829 745 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 HMGN1P17-201ENST00000513734 295 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 PRMT5P1-201ENST00000514351 598 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 RFPL4AP3-201ENST00000515267 345 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 PMS2P3-207ENST00000529061 717 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AP005119.1-201ENST00000580956 292 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AC010503.3-201ENST00000594355 540 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AL606537.1-201ENST00000607258 2011 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AC090607.5-201ENST00000615692 224 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 AC138965.3-201ENST00000623875 498 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 CASC19-255ENST00000641733 1385 ntBASIC4.59□□□□□ -1.67
CTNNBIP1Q9NSA3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CTNNBIP1Q9NSA3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CTNNBIP1Q9NSA3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.59□□□□□ -1.68
CTNNBIP1Q9NSA3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
CTNNBIP1Q9NSA3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CTNNBIP1Q9NSA3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.59□□□□□ -1.68
CTNNBIP1Q9NSA3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 AC008627.1-201ENST00000517511 1704 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 RNA5SP326-201ENST00000363209 110 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 MIR130A-201ENST00000385274 89 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 VDAC2P1-201ENST00000399358 958 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 RPS14P4-201ENST00000415880 418 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 NIFKP3-201ENST00000417799 865 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 RIMKLBP2-201ENST00000424737 654 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 NDUFB4P8-201ENST00000435351 367 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 NANOGP9-201ENST00000439890 892 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 AC073465.2-201ENST00000440938 498 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 RPL5P25-201ENST00000441148 775 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 IGBP1P3-201ENST00000447449 1000 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 AC005077.1-201ENST00000449226 375 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 HMGB1P7-201ENST00000450921 612 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 GEMIN2P1-201ENST00000454246 752 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 AC083899.1-201ENST00000454465 3819 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 RN7SL570P-201ENST00000484405 292 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 AC018639.1-201ENST00000492994 442 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 RFPL4AP5-201ENST00000514977 504 ntBASIC4.58□□□□□ -1.68
CTNNBIP1Q9NSA3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms