Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 OR2AT2P-201ENST00000413438 905 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 RPS26P38-201ENST00000414476 348 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 H2AFZP6-201ENST00000444403 394 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AKR1D1P1-201ENST00000457236 936 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AC092757.1-201ENST00000467293 467 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 RN7SL306P-201ENST00000492941 296 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AC104136.1-201ENST00000512969 394 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 BNIP3P26-201ENST00000600827 554 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AP001506.1-201ENST00000615444 211 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 OR8G7P-201ENST00000616658 848 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AC079228.1-201ENST00000624774 1049 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 LINC01748-205ENST00000635616 2143 ntTSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 OR52B5P-202ENST00000641118 1110 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 NOS2-202ENST00000621962 3345 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 CASC15-203ENST00000605917 4461 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 PDE1A-203ENST00000409365 2034 ntTSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AMPH-201ENST00000325590 3145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 AL590065.1-201ENST00000603371 4774 ntBASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL25A1Q9BXS0 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.46□□□□□ -1.21
COL25A1Q9BXS0 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC7.46□□□□□ -1.21
COL25A1Q9BXS0 LINC00210-201ENST00000431637 1584 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
COL25A1Q9BXS0 AC008498.2-201ENST00000624033 2322 ntBASIC7.46□□□□□ -1.21
COL25A1Q9BXS0 DDX43P1-201ENST00000510713 1763 ntBASIC7.46□□□□□ -1.21
COL25A1Q9BXS0 LDB2-201ENST00000304523 2548 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
COL25A1Q9BXS0 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
COL25A1Q9BXS0 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.46□□□□□ -1.21
COL25A1Q9BXS0 HDAC1P1-201ENST00000455482 1445 ntBASIC7.46□□□□□ -1.21
COL25A1Q9BXS0 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.46□□□□□ -1.21
COL25A1Q9BXS0 SUMO2-202ENST00000420826 3190 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 SS18-203ENST00000415083 3414 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 RAB28P1-201ENST00000411517 641 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 RPL35AP24-201ENST00000413846 330 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 HMGB3P23-201ENST00000414981 585 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC009237.2-201ENST00000421358 284 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 VN1R20P-201ENST00000425215 966 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AL035410.1-201ENST00000427409 427 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC244505.2-201ENST00000435089 759 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 BRK1P2-201ENST00000442875 223 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 DNAJC19P5-201ENST00000443295 316 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC244505.5-201ENST00000443639 207 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AL592437.1-201ENST00000443781 492 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC233279.1-201ENST00000455300 423 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 VPS25P1-201ENST00000455691 508 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 RN7SL552P-201ENST00000462094 276 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC130509.1-201ENST00000464158 433 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 RNU6-1046P-201ENST00000516538 107 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 EIF4A2P5-201ENST00000529914 499 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 CR383656.6-201ENST00000550518 394 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 GTF2IP22-201ENST00000554443 182 ntBASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC7.46□□□□□ -1.22
COL25A1Q9BXS0 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms