Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC8.4□□□□□ -1.06
TRIM47Q96LD4 CASC19-274ENST00000642018 970 ntBASIC8.4□□□□□ -1.06
TRIM47Q96LD4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TRIM47Q96LD4 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
TRIM47Q96LD4 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
TRIM47Q96LD4 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
TRIM47Q96LD4 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC8.4□□□□□ -1.07
TRIM47Q96LD4 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC8.4□□□□□ -1.07
TRIM47Q96LD4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
TRIM47Q96LD4 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TRIM47Q96LD4 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TRIM47Q96LD4 FLJ42393-201ENST00000623801 2270 ntBASIC8.4□□□□□ -1.07
TRIM47Q96LD4 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 SAMMSON-222ENST00000641901 2727 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC093225.1-201ENST00000506867 1408 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 EED-206ENST00000527888 1422 ntTSL 2 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 Y_RNA.578-201ENST00000390903 88 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 RPL34P19-201ENST00000415903 342 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 MTCO3P12-201ENST00000416718 547 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 RPL7AP51-201ENST00000422016 760 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 RPS7P12-201ENST00000422385 582 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 OR8F1P-201ENST00000425243 930 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 HNRNPA1P29-201ENST00000426409 879 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 DEFB130D-201ENST00000426866 237 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 RPL3P11-201ENST00000434028 1146 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AL731892.1-201ENST00000437364 1192 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 DNAJC19P4-201ENST00000440115 345 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 GDI2P2-201ENST00000445131 608 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AL590639.1-201ENST00000456484 337 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 RN7SL393P-201ENST00000463588 296 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 PGBD4P1-201ENST00000473644 407 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC005550.2-201ENST00000476382 318 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC013828.1-201ENST00000481845 158 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 NPY6R-201ENST00000503807 1112 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC026414.1-201ENST00000504046 698 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC021678.1-201ENST00000505195 936 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC021146.7-201ENST00000509604 775 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 MTCO1P30-201ENST00000515244 580 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 OR4A17P-201ENST00000526032 904 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 NDUFS5P6-201ENST00000529136 295 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC010198.2-201ENST00000550612 259 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 IGHV1OR15-3-201ENST00000564926 351 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 ISCA1P3-201ENST00000577104 373 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 PLEKHA3P1-201ENST00000598554 894 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC011500.1-201ENST00000601963 469 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 CR382285.1-202ENST00000604687 547 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AL590396.3-201ENST00000636334 300 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 THAP12P3-201ENST00000456373 2266 ntBASIC8.39□□□□□ -1.07
TRIM47Q96LD4 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM47Q96LD4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms