Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 PDZK1P1-202ENST00000425209 1350 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 ADAM24P-201ENST00000398655 2101 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AC005042.1-201ENST00000393397 800 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 RNA5SP431-201ENST00000410312 120 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 SNORA79B-201ENST00000410557 148 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 NIFKP3-201ENST00000417799 865 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 BX284632.2-201ENST00000421091 399 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 BX323845.3-201ENST00000428215 527 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 BX276092.6-201ENST00000430476 250 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 EIF5AP4-201ENST00000441206 465 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AL512605.1-202ENST00000441919 381 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AL359955.2-201ENST00000445380 353 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 CFL1P4-201ENST00000451536 498 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 BX276092.8-201ENST00000455722 250 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 RPS23P2-201ENST00000463671 415 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 SCARNA18.1-201ENST00000516330 83 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AL358913.1-201ENST00000554342 121 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AC007956.1-201ENST00000555623 542 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AL845552.1-201ENST00000556820 323 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AP001437.1-201ENST00000608783 456 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 MIR6793-201ENST00000612376 63 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 MIR6806-201ENST00000622141 64 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 CASC19-274ENST00000642018 970 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 AC144833.1-201ENST00000567953 4089 ntBASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CLHC1Q8NHS4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 RNA5SP273-201ENST00000362484 113 ntBASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 SNORA70.6-201ENST00000383934 134 ntBASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 OR10T1P-201ENST00000424327 947 ntBASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 NDUFS5P5-201ENST00000437256 321 ntBASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 AL356801.1-201ENST00000559320 294 ntBASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 OR51C1P-201ENST00000608504 942 ntBASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 AC005618.4-201ENST00000625053 554 ntBASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 AP000473.2-201ENST00000602659 1537 ntBASIC5.43□□□□□ -1.54
CLHC1Q8NHS4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms