Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 TPT1P12-201ENST00000448968 492 ntBASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 RPL37AP8-201ENST00000494116 276 ntBASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 RN7SKP253-201ENST00000516424 309 ntBASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 OR5AM1P-201ENST00000532136 1032 ntBASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 AGGF1P7-201ENST00000562369 913 ntBASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 AC209154.1-201ENST00000582156 337 ntBASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CFAP43Q8NDM7 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 AC002090.1-201ENST00000625000 2138 ntBASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 AL138878.2-201ENST00000440581 1241 ntBASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 TRY2P-201ENST00000448860 689 ntBASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 RAB9BP1-201ENST00000519581 626 ntBASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 AL353662.3-201ENST00000625131 237 ntBASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 AC016251.2-201ENST00000623393 3089 ntBASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 AL662795.2-201ENST00000624252 3706 ntBASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 AP004607.3-201ENST00000530354 3915 ntBASIC8.6□□□□□ -1.03
CFAP43Q8NDM7 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 RNU1-136P-201ENST00000384181 164 ntBASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 AC068138.1-201ENST00000412635 217 ntBASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 OR10T1P-201ENST00000424327 947 ntBASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 RPL7P56-201ENST00000429441 717 ntBASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 RN7SKP99-201ENST00000517028 307 ntBASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 AL034546.1-201ENST00000623740 3693 ntBASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 AC123769.2-201ENST00000624332 5984 ntBASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 AC012618.3-205ENST00000637896 1496 ntBASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 AC093162.1-201ENST00000419682 124 ntBASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 STRADBP1-201ENST00000478954 1281 ntBASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 MAL2-208ENST00000523307 556 ntTSL 4 BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 AL513327.3-201ENST00000602618 469 ntBASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 AC009704.2-201ENST00000618739 483 ntBASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CFAP43Q8NDM7 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
CFAP43Q8NDM7 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC8.59□□□□□ -1.04
CFAP43Q8NDM7 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 INTS6P1-201ENST00000504674 2530 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms