Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 SNORA77.2-201ENST00000408571 112 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AL354707.3-201ENST00000427308 331 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 HIGD1AP12-201ENST00000427832 281 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AC022022.1-201ENST00000430304 178 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 FTH1P16-201ENST00000435241 552 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 FABP5P2-201ENST00000439042 408 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 DNAJA1P5-201ENST00000440278 943 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 RPL7P48-201ENST00000461513 746 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AP002453.1-201ENST00000492327 668 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AC104108.1-201ENST00000509930 412 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AC119751.5-201ENST00000514077 770 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 MRPS36P5-201ENST00000551909 298 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 OR11H3P-201ENST00000554547 982 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 MIR548Y-201ENST00000582739 110 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 DUXAP3-201ENST00000603616 594 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AC108865.2-201ENST00000606881 432 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AC097478.2-201ENST00000610572 514 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 FRG1HP-204ENST00000617940 757 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AC015660.5-201ENST00000623238 564 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AL390318.1-201ENST00000624564 687 ntBASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNPOQ8N3V7 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AC007406.5-201ENST00000570140 3170 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 RNU6-1242P-201ENST00000391052 103 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AC004386.1-201ENST00000393214 761 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 LRRC37BP1-201ENST00000398851 714 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 RN7SKP271-201ENST00000410528 320 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 DUTP4-201ENST00000424782 475 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 HIGD1AP4-201ENST00000430194 280 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 CASP3P1-201ENST00000446037 609 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 RPL31P44-201ENST00000447680 377 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 GM2AP2-201ENST00000491764 562 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 LSM3P4-201ENST00000502948 309 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 RN7SKP98-201ENST00000517070 156 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 IGLVIV-64-201ENST00000518581 301 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 IGKV3D-34-201ENST00000522638 302 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AC008429.2-201ENST00000523057 864 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AL133399.1-201ENST00000527476 298 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms