Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 GAPDHP24-201ENST00000328713 983 ntBASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 RIMKLBP2-201ENST00000424737 654 ntBASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 RPL5P2-201ENST00000429598 854 ntBASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 AL359265.1-201ENST00000440296 795 ntBASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 AC019084.1-201ENST00000457337 432 ntBASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 RN7SL170P-201ENST00000487098 295 ntBASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 OR5AM1P-201ENST00000532136 1032 ntBASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 H3F3BP2-201ENST00000583907 357 ntBASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 FO681491.1-202ENST00000623392 737 ntBASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 AC021766.1-201ENST00000624404 741 ntBASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 AL390318.1-201ENST00000624564 687 ntBASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.77□□□□□ -1.49
CDKL3Q8IVW4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 SNORA64.1-201ENST00000362600 132 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 RN7SKP275-201ENST00000364626 301 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 RN7SKP187-201ENST00000365536 330 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 NPM1P37-201ENST00000403105 874 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 AL133482.1-201ENST00000415988 498 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 RPL24P2-201ENST00000421023 475 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 MGAT2P2-201ENST00000427194 797 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 HMGB3P24-201ENST00000433260 622 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 IGBP1P3-201ENST00000447449 1000 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 AL596266.1-201ENST00000448132 400 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 HMGB1P42-201ENST00000532126 553 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 AC015802.2-201ENST00000589690 189 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 RN7SL544P-201ENST00000617232 284 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 RN7SL763P-201ENST00000620922 284 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 AC099654.11-201ENST00000638857 294 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 AC073869.7-201ENST00000640874 297 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 AC087565.3-203ENST00000641018 837 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 AC079097.1-201ENST00000512187 1399 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 ABCC13-202ENST00000463099 3842 ntBASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDKL3Q8IVW4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AC068870.1-201ENST00000563737 2455 ntBASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AC245060.4-201ENST00000413293 1121 ntBASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AC066692.1-201ENST00000421721 457 ntBASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AC127526.2-201ENST00000426436 775 ntBASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 RPS27AP6-201ENST00000427962 448 ntBASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 RPL7P56-201ENST00000429441 717 ntBASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.75□□□□□ -1.49
CDKL3Q8IVW4 AC006335.2-201ENST00000437993 330 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms