Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AC121758.1-202ENST00000556917 658 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AL139099.4-201ENST00000614802 114 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 uc_338.31-201ENST00000615595 186 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AC004801.6-201ENST00000616571 978 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 MIR6721-201ENST00000617181 87 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AC022400.9-201ENST00000623633 273 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 SMG1P7-201ENST00000565246 2704 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 HSPD1P9-201ENST00000420325 1636 ntBASIC4.39□□□□□ -1.71
HIST1H1AQ02539 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HIST1H1AQ02539 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 RNA5SP232-201ENST00000364144 119 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 SNORA70.6-201ENST00000383934 134 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 GCNT1P4-201ENST00000404096 329 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 NPM1P40-201ENST00000412758 733 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 THEM7P-201ENST00000419556 672 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AC242426.1-201ENST00000435270 960 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 BMS1P10-201ENST00000443754 1120 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AC006539.1-201ENST00000481419 501 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 RN7SL591P-201ENST00000496150 292 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AP003396.4-201ENST00000527574 265 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AC092332.1-201ENST00000563684 829 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 MIR3154-201ENST00000577829 84 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 MIR4502-201ENST00000580432 81 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 MIR4701-201ENST00000583094 63 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AL353729.2-201ENST00000605859 1249 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 CDY11P-201ENST00000447168 1651 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 AC021242.1-201ENST00000507315 2035 ntBASIC4.38□□□□□ -1.71
HIST1H1AQ02539 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
HIST1H1AQ02539 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 MTCO1P15-201ENST00000529569 1526 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 AC004817.4-201ENST00000602396 3625 ntBASIC4.37□□□□□ -1.71
HIST1H1AQ02539 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HIST1H1AQ02539 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms