Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK3Q00526 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK3Q00526 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK3Q00526 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.69□□□□□ -1.5
CDK3Q00526 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CDK3Q00526 GTF2IP4-201ENST00000453092 2054 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CDK3Q00526 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CDK3Q00526 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK3Q00526 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CDK3Q00526 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CDK3Q00526 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK3Q00526 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK3Q00526 AL137141.1-201ENST00000624622 4836 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
CDK3Q00526 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK3Q00526 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK3Q00526 RNU6-316P-201ENST00000391027 107 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK3Q00526 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK3Q00526 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK3Q00526 RN7SKP293-201ENST00000411389 296 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 AC098592.2-201ENST00000413158 265 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 BMS1P17-202ENST00000416720 316 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 NIFKP3-201ENST00000417799 865 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.68□□□□□ -1.5
CDK3Q00526 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.68□□□□□ -1.5
CDK3Q00526 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK3Q00526 Z84478.1-201ENST00000438230 1219 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 EEF1B2P6-201ENST00000445713 673 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 OR7E116P-201ENST00000448529 957 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 OR2AF1P-201ENST00000454899 889 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 RPL31P53-201ENST00000457065 348 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CDK3Q00526 RPS3AP15-201ENST00000483874 781 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDK3Q00526 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK3Q00526 SNORA81.2-201ENST00000516868 170 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 AC078899.1-201ENST00000521432 1185 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK3Q00526 MRPS16P1-201ENST00000523462 412 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK3Q00526 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.68□□□□□ -1.5
CDK3Q00526 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK3Q00526 AC022404.1-201ENST00000555320 273 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK3Q00526 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK3Q00526 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK3Q00526 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK3Q00526 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.68□□□□□ -1.5
CDK3Q00526 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK3Q00526 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK3Q00526 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK3Q00526 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.68□□□□□ -1.5
CDK3Q00526 AC063977.5-201ENST00000601044 974 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK3Q00526 AC004477.3-201ENST00000614061 590 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 AL354696.1-201ENST00000614652 497 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 AL590410.1-201ENST00000617925 333 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 AC018659.2-201ENST00000624690 715 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 MAPK10-350ENST00000641777 965 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK3Q00526 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK3Q00526 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
CDK3Q00526 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK3Q00526 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CDK3Q00526 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDK3Q00526 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK3Q00526 MFSD8-239ENST00000641590 2479 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK3Q00526 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK3Q00526 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK3Q00526 MRE11P1-201ENST00000464884 2127 ntBASIC5.68□□□□□ -1.5
CDK3Q00526 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDK3Q00526 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK3Q00526 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK3Q00526 AC073365.1-203ENST00000641055 1992 ntBASIC5.67□□□□□ -1.5
CDK3Q00526 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK3Q00526 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDK3Q00526 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK3Q00526 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK3Q00526 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK3Q00526 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK3Q00526 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK3Q00526 AC034229.2-201ENST00000566945 2508 ntBASIC5.67□□□□□ -1.5
CDK3Q00526 CR382285.2-201ENST00000624662 1495 ntBASIC5.67□□□□□ -1.5
CDK3Q00526 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK3Q00526 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK3Q00526 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK3Q00526 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK3Q00526 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK3Q00526 AL589826.1-201ENST00000340697 249 ntBASIC5.67□□□□□ -1.5
CDK3Q00526 RNU1-59P-201ENST00000364829 162 ntBASIC5.67□□□□□ -1.5
CDK3Q00526 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK3Q00526 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDK3Q00526 AL139039.2-201ENST00000407436 479 ntBASIC5.67□□□□□ -1.5
CDK3Q00526 RMRPP5-201ENST00000411156 267 ntBASIC5.67□□□□□ -1.5
CDK3Q00526 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK3Q00526 VN1R31P-201ENST00000417498 730 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms