Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
HOXA9P31269 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HOXA9P31269 MIR130A-201ENST00000385274 89 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.95□□□□□ -1.46
HOXA9P31269 NANOGP4-201ENST00000427230 913 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.95□□□□□ -1.46
HOXA9P31269 ZNF101P1-201ENST00000435701 1720 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXA9P31269 VDAC2P4-201ENST00000452925 711 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 AP000547.1-201ENST00000454360 617 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 OR5M14P-201ENST00000506803 618 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 HIGD1AP14-201ENST00000507617 282 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXA9P31269 RNA5SP92-201ENST00000516437 110 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 AC090424.1-201ENST00000535243 736 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.95□□□□□ -1.46
HOXA9P31269 HAUS8P1-201ENST00000549005 542 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXA9P31269 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.95□□□□□ -1.46
HOXA9P31269 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXA9P31269 AL163952.1-202ENST00000569625 600 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.95□□□□□ -1.46
HOXA9P31269 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.95□□□□□ -1.46
HOXA9P31269 NANOGP3-201ENST00000605855 286 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 WBP1LP8-201ENST00000617401 327 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 AC241377.1-201ENST00000619797 406 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 CASC19-222ENST00000641321 1173 ntBASIC5.95□□□□□ -1.46
HOXA9P31269 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.95□□□□□ -1.46
HOXA9P31269 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXA9P31269 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXA9P31269 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXA9P31269 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXA9P31269 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXA9P31269 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HOXA9P31269 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXA9P31269 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXA9P31269 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HOXA9P31269 AL161756.3-201ENST00000641216 2071 ntBASIC5.94□□□□□ -1.46
HOXA9P31269 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXA9P31269 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXA9P31269 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXA9P31269 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXA9P31269 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HOXA9P31269 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HOXA9P31269 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HOXA9P31269 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXA9P31269 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXA9P31269 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.94□□□□□ -1.46
HOXA9P31269 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXA9P31269 AC006335.2-201ENST00000437993 330 ntBASIC5.94□□□□□ -1.46
HOXA9P31269 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXA9P31269 PTMAP6-201ENST00000439110 327 ntBASIC5.94□□□□□ -1.46
HOXA9P31269 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXA9P31269 RPS21P4-201ENST00000487122 248 ntBASIC5.94□□□□□ -1.46
HOXA9P31269 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXA9P31269 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXA9P31269 AC118658.2-201ENST00000618697 459 ntBASIC5.94□□□□□ -1.46
HOXA9P31269 AF117829.2-201ENST00000619538 361 ntBASIC5.94□□□□□ -1.46
HOXA9P31269 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXA9P31269 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXA9P31269 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXA9P31269 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXA9P31269 AC092070.2-203ENST00000598377 3644 ntBASIC5.94□□□□□ -1.46
HOXA9P31269 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXA9P31269 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.94□□□□□ -1.46
HOXA9P31269 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXA9P31269 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA9P31269 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
HOXA9P31269 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.93□□□□□ -1.46
HOXA9P31269 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA9P31269 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA9P31269 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXA9P31269 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA9P31269 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXA9P31269 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HOXA9P31269 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXA9P31269 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.93□□□□□ -1.46
HOXA9P31269 VN1R21P-201ENST00000426703 765 ntBASIC5.93□□□□□ -1.46
HOXA9P31269 AL139148.1-201ENST00000427122 680 ntBASIC5.93□□□□□ -1.46
HOXA9P31269 RPS27P18-201ENST00000431701 247 ntBASIC5.93□□□□□ -1.46
HOXA9P31269 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXA9P31269 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXA9P31269 AC005532.2-201ENST00000467154 373 ntBASIC5.93□□□□□ -1.46
HOXA9P31269 RN7SL329P-201ENST00000467740 299 ntBASIC5.93□□□□□ -1.46
HOXA9P31269 AC079841.1-201ENST00000481228 950 ntBASIC5.93□□□□□ -1.46
HOXA9P31269 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms