Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL845321.1-201ENST00000444603 348 ntBASIC6.29□□□□□ -1.4
ATF4P18848 DEFA11P-201ENST00000446470 261 ntBASIC6.29□□□□□ -1.4
ATF4P18848 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC6.29□□□□□ -1.4
ATF4P18848 RPL26P28-201ENST00000451325 435 ntBASIC6.29□□□□□ -1.4
ATF4P18848 BUB3P1-201ENST00000458451 999 ntBASIC6.29□□□□□ -1.4
ATF4P18848 AC008026.1-201ENST00000460492 447 ntBASIC6.29□□□□□ -1.4
ATF4P18848 COX7A2L-204ENST00000463055 540 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATF4P18848 RPS27P12-201ENST00000464146 258 ntBASIC6.29□□□□□ -1.4
ATF4P18848 SCG5-206ENST00000494364 1148 ntTSL 5 BASIC6.29□□□□□ -1.4
ATF4P18848 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.29□□□□□ -1.4
ATF4P18848 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC6.29□□□□□ -1.4
ATF4P18848 AC004069.2-201ENST00000505438 1114 ntBASIC6.29□□□□□ -1.4
ATF4P18848 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.29□□□□□ -1.4
ATF4P18848 SNX5P1-201ENST00000505757 1041 ntBASIC6.29□□□□□ -1.4
ATF4P18848 MRPL49P1-201ENST00000505951 535 ntBASIC6.29□□□□□ -1.4
ATF4P18848 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.29□□□□□ -1.4
ATF4P18848 AC008868.1-201ENST00000509786 737 ntBASIC6.29□□□□□ -1.4
ATF4P18848 MTCYBP43-201ENST00000513621 740 ntBASIC6.29□□□□□ -1.4
ATF4P18848 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC6.29□□□□□ -1.4
ATF4P18848 RNA5SP216-201ENST00000516111 123 ntBASIC6.29□□□□□ -1.4
ATF4P18848 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.29□□□□□ -1.4
ATF4P18848 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATF4P18848 IGLVI-68-201ENST00000519525 345 ntBASIC6.29□□□□□ -1.4
ATF4P18848 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.29□□□□□ -1.4
ATF4P18848 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC6.29□□□□□ -1.4
ATF4P18848 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC6.29□□□□□ -1.4
ATF4P18848 BCAS2P1-201ENST00000528022 632 ntBASIC6.29□□□□□ -1.4
ATF4P18848 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.29□□□□□ -1.4
ATF4P18848 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC6.29□□□□□ -1.4
ATF4P18848 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC6.29□□□□□ -1.4
ATF4P18848 AC016954.1-201ENST00000549976 745 ntBASIC6.29□□□□□ -1.4
ATF4P18848 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.29□□□□□ -1.4
ATF4P18848 APEX1-214ENST00000557054 888 ntTSL 5 BASIC6.29□□□□□ -1.4
ATF4P18848 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.29□□□□□ -1.4
ATF4P18848 AC036176.3-201ENST00000602456 418 ntBASIC6.29□□□□□ -1.4
ATF4P18848 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC6.29□□□□□ -1.4
ATF4P18848 AC015540.1-201ENST00000615828 501 ntBASIC6.29□□□□□ -1.4
ATF4P18848 AC231657.1-201ENST00000624313 397 ntBASIC6.29□□□□□ -1.4
ATF4P18848 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC6.29□□□□□ -1.4
ATF4P18848 AL583852.1-201ENST00000635018 572 ntTSL 4 BASIC6.29□□□□□ -1.4
ATF4P18848 OR7E91P-202ENST00000642062 1198 ntBASIC6.29□□□□□ -1.4
ATF4P18848 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.29□□□□□ -1.4
ATF4P18848 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.29□□□□□ -1.4
ATF4P18848 AL022393.1-201ENST00000625142 1677 ntBASIC6.29□□□□□ -1.4
ATF4P18848 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.29□□□□□ -1.4
ATF4P18848 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.29□□□□□ -1.4
ATF4P18848 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ATF4P18848 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATF4P18848 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
ATF4P18848 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ATF4P18848 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ATF4P18848 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ATF4P18848 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.29□□□□□ -1.4
ATF4P18848 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 CASC19-246ENST00000641625 1606 ntBASIC6.28□□□□□ -1.4
ATF4P18848 LINC00561-201ENST00000565815 2738 ntBASIC6.28□□□□□ -1.4
ATF4P18848 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC6.28□□□□□ -1.4
ATF4P18848 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
ATF4P18848 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.28□□□□□ -1.4
ATF4P18848 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
ATF4P18848 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ATF4P18848 AP005432.1-201ENST00000580891 3485 ntBASIC6.28□□□□□ -1.4
ATF4P18848 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 DLD-205ENST00000440410 1993 ntTSL 2 BASIC6.28□□□□□ -1.4
ATF4P18848 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ATF4P18848 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 RNU6-660P-201ENST00000364566 109 ntBASIC6.28□□□□□ -1.4
ATF4P18848 RNU4-91P-201ENST00000364778 135 ntBASIC6.28□□□□□ -1.4
ATF4P18848 RNY3P10-201ENST00000384764 102 ntBASIC6.28□□□□□ -1.4
ATF4P18848 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 VIM2P-201ENST00000402383 1294 ntBASIC6.28□□□□□ -1.4
ATF4P18848 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ATF4P18848 OR2W4P-201ENST00000406496 926 ntBASIC6.28□□□□□ -1.4
ATF4P18848 RN7SKP181-201ENST00000411188 316 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC073264.1-201ENST00000411508 416 ntBASIC6.28□□□□□ -1.4
ATF4P18848 NPM1P40-201ENST00000412758 733 ntBASIC6.28□□□□□ -1.4
ATF4P18848 PRELID3BP11-201ENST00000414230 479 ntBASIC6.28□□□□□ -1.4
ATF4P18848 NONOP2-201ENST00000414613 1231 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.28□□□□□ -1.4
ATF4P18848 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.28□□□□□ -1.4
ATF4P18848 SLC8A1-AS1-203ENST00000418854 545 ntTSL 4 BASIC6.28□□□□□ -1.4
ATF4P18848 NME1P1-201ENST00000420914 382 ntBASIC6.28□□□□□ -1.4
ATF4P18848 CYCSP46-201ENST00000423569 204 ntBASIC6.28□□□□□ -1.4
ATF4P18848 RPL7P56-201ENST00000429441 717 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC6.28□□□□□ -1.4
ATF4P18848 KRT18P53-201ENST00000431919 117 ntBASIC6.28□□□□□ -1.4
ATF4P18848 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC6.28□□□□□ -1.4
ATF4P18848 AC069154.1-201ENST00000432914 542 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AC010881.1-201ENST00000433830 235 ntBASIC6.28□□□□□ -1.4
ATF4P18848 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC6.28□□□□□ -1.4
ATF4P18848 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC6.28□□□□□ -1.4
ATF4P18848 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC6.28□□□□□ -1.4
ATF4P18848 TRIM60P18-201ENST00000441518 828 ntBASIC6.28□□□□□ -1.4
ATF4P18848 AL138881.1-201ENST00000443445 789 ntTSL 3 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms