Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 Y_RNA.453-201ENST00000384223 109 ntBASIC10.46□□□□□ -0.73
CHGAP10645 SNORD65.1-201ENST00000390889 71 ntBASIC10.46□□□□□ -0.73
CHGAP10645 RNU6-1009P-201ENST00000390996 107 ntBASIC10.46□□□□□ -0.73
CHGAP10645 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CHGAP10645 AC007068.1-201ENST00000396690 844 ntBASIC10.46□□□□□ -0.73
CHGAP10645 CYCSP45-201ENST00000402289 315 ntBASIC10.46□□□□□ -0.73
CHGAP10645 RN7SKP205-201ENST00000410999 307 ntBASIC10.46□□□□□ -0.73
CHGAP10645 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC10.46□□□□□ -0.73
CHGAP10645 AC006065.1-201ENST00000422539 802 ntBASIC10.46□□□□□ -0.73
CHGAP10645 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC10.46□□□□□ -0.73
CHGAP10645 NPM1P24-201ENST00000428039 894 ntBASIC10.46□□□□□ -0.73
CHGAP10645 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
CHGAP10645 RPL3P11-201ENST00000434028 1146 ntBASIC10.46□□□□□ -0.73
CHGAP10645 AL954705.1-201ENST00000435277 559 ntBASIC10.46□□□□□ -0.73
CHGAP10645 AC234771.4-201ENST00000441416 730 ntBASIC10.46□□□□□ -0.73
CHGAP10645 RBMY3AP-201ENST00000449381 1145 ntBASIC10.46□□□□□ -0.73
CHGAP10645 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CHGAP10645 GAPDHP53-201ENST00000458397 924 ntBASIC10.46□□□□□ -0.73
CHGAP10645 AC079841.1-201ENST00000481228 950 ntBASIC10.46□□□□□ -0.73
CHGAP10645 GAPDHP39-201ENST00000481866 979 ntBASIC10.46□□□□□ -0.73
CHGAP10645 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
CHGAP10645 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC10.46□□□□□ -0.73
CHGAP10645 ARL2BPP6-201ENST00000512757 439 ntBASIC10.46□□□□□ -0.73
CHGAP10645 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC10.46□□□□□ -0.73
CHGAP10645 CA1-215ENST00000522389 551 ntTSL 3 BASIC10.46□□□□□ -0.73
CHGAP10645 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC10.46□□□□□ -0.73
CHGAP10645 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC10.46□□□□□ -0.73
CHGAP10645 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CHGAP10645 NIFKP8-201ENST00000560500 874 ntBASIC10.46□□□□□ -0.73
CHGAP10645 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC10.46□□□□□ -0.73
CHGAP10645 AL049840.5-201ENST00000602827 552 ntBASIC10.46□□□□□ -0.73
CHGAP10645 BNIP3P9-201ENST00000603714 553 ntBASIC10.46□□□□□ -0.73
CHGAP10645 AL353726.1-201ENST00000614041 1000 ntBASIC10.46□□□□□ -0.73
CHGAP10645 AC002553.4-201ENST00000616896 331 ntBASIC10.46□□□□□ -0.73
CHGAP10645 AC211486.4-201ENST00000621495 113 ntBASIC10.46□□□□□ -0.73
CHGAP10645 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC10.46□□□□□ -0.73
CHGAP10645 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC10.46□□□□□ -0.73
CHGAP10645 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC10.46□□□□□ -0.73
CHGAP10645 ATP5A1P1-201ENST00000454088 1321 ntBASIC10.46□□□□□ -0.73
CHGAP10645 AC109315.1-201ENST00000584143 1347 ntBASIC10.46□□□□□ -0.73
CHGAP10645 EEF1A1P9-201ENST00000514975 1383 ntBASIC10.46□□□□□ -0.74
CHGAP10645 CR383658.2-201ENST00000547576 1525 ntBASIC10.46□□□□□ -0.74
CHGAP10645 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC10.46□□□□□ -0.74
CHGAP10645 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CHGAP10645 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC10.46□□□□□ -0.74
CHGAP10645 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
CHGAP10645 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CHGAP10645 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHGAP10645 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
CHGAP10645 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CHGAP10645 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHGAP10645 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHGAP10645 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC10.45□□□□□ -0.74
CHGAP10645 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CHGAP10645 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CHGAP10645 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CHGAP10645 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC10.45□□□□□ -0.74
CHGAP10645 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHGAP10645 AC017104.4-201ENST00000636283 1592 ntBASIC10.45□□□□□ -0.74
CHGAP10645 MTCO1P23-201ENST00000415223 1526 ntBASIC10.45□□□□□ -0.74
CHGAP10645 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CHGAP10645 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC10.45□□□□□ -0.74
CHGAP10645 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHGAP10645 AL590143.1-201ENST00000405071 138 ntBASIC10.45□□□□□ -0.74
CHGAP10645 SNX10-203ENST00000409367 746 ntTSL 5 BASIC10.45□□□□□ -0.74
CHGAP10645 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC10.45□□□□□ -0.74
CHGAP10645 VDAC1P10-201ENST00000416715 891 ntBASIC10.45□□□□□ -0.74
CHGAP10645 RPA2P2-201ENST00000419698 796 ntBASIC10.45□□□□□ -0.74
CHGAP10645 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC10.45□□□□□ -0.74
CHGAP10645 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC10.45□□□□□ -0.74
CHGAP10645 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC10.45□□□□□ -0.74
CHGAP10645 RPS25P9-201ENST00000435591 252 ntBASIC10.45□□□□□ -0.74
CHGAP10645 AL512593.1-201ENST00000444758 779 ntBASIC10.45□□□□□ -0.74
CHGAP10645 GDI2P2-201ENST00000445131 608 ntBASIC10.45□□□□□ -0.74
CHGAP10645 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC10.45□□□□□ -0.74
CHGAP10645 IGKV1OR2-2-201ENST00000451163 355 ntBASIC10.45□□□□□ -0.74
CHGAP10645 AC091951.2-201ENST00000500762 203 ntBASIC10.45□□□□□ -0.74
CHGAP10645 MTND5P5-201ENST00000503764 376 ntBASIC10.45□□□□□ -0.74
CHGAP10645 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC10.45□□□□□ -0.74
CHGAP10645 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC10.45□□□□□ -0.74
CHGAP10645 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC10.45□□□□□ -0.74
CHGAP10645 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC10.45□□□□□ -0.74
CHGAP10645 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC10.45□□□□□ -0.74
CHGAP10645 PCMTD1P2-201ENST00000565017 355 ntBASIC10.45□□□□□ -0.74
CHGAP10645 MTCO3P13-201ENST00000577757 781 ntBASIC10.45□□□□□ -0.74
CHGAP10645 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC10.45□□□□□ -0.74
CHGAP10645 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC10.45□□□□□ -0.74
CHGAP10645 AC068802.1-201ENST00000603420 732 ntBASIC10.45□□□□□ -0.74
CHGAP10645 AL445670.1-201ENST00000618889 801 ntBASIC10.45□□□□□ -0.74
CHGAP10645 AC007342.8-201ENST00000623278 678 ntBASIC10.45□□□□□ -0.74
CHGAP10645 FAM157B-203ENST00000639350 358 ntBASIC10.45□□□□□ -0.74
CHGAP10645 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHGAP10645 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHGAP10645 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
CHGAP10645 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHGAP10645 MAPK10-279ENST00000641157 2449 ntBASIC10.45□□□□□ -0.74
CHGAP10645 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC10.45□□□□□ -0.74
CHGAP10645 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHGAP10645 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC10.45□□□□□ -0.74
CHGAP10645 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms