Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
TMIGD3P0DMS9 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.71□□□□□ -1.49
TMIGD3P0DMS9 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TMIGD3P0DMS9 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.71□□□□□ -1.49
TMIGD3P0DMS9 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
TMIGD3P0DMS9 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TMIGD3P0DMS9 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 SNORD16-201ENST00000362803 99 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 RNA5SP105-201ENST00000391123 113 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AL139805.1-201ENST00000407837 289 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 RNA5SP251-201ENST00000410614 137 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 DHFRP2-201ENST00000414224 547 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 OR51A6P-201ENST00000418680 1004 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 MGAT2P2-201ENST00000427194 797 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AL645936.1-201ENST00000441979 518 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 HMGB1P7-201ENST00000450921 612 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AP002884.1-201ENST00000479691 655 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 RPS3AP6-201ENST00000484430 795 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AP002453.1-201ENST00000492327 668 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 ZNF519P4-201ENST00000514008 125 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AP000859.1-201ENST00000525536 307 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 OR4A40P-201ENST00000533878 948 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AC008507.2-201ENST00000588402 1176 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AC079315.1-201ENST00000602952 623 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AC069431.2-201ENST00000604149 1099 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AC073046.2-201ENST00000604756 527 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AL357140.4-201ENST00000636827 412 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AP005432.1-201ENST00000580891 3485 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 IFIT1P1-201ENST00000400497 1449 ntBASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
TMIGD3P0DMS9 AC068769.1-201ENST00000474767 2426 ntBASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 AC010132.2-201ENST00000295493 1043 ntBASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 RNA5SP514-201ENST00000363717 111 ntBASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 RNA5SP433-201ENST00000364491 114 ntBASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 OR7E156P-201ENST00000400303 464 ntBASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 NPM1P37-201ENST00000403105 874 ntBASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 RPL10P10-201ENST00000403509 664 ntBASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 GCNT1P4-201ENST00000404096 329 ntBASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 TCEA1P2-201ENST00000420496 906 ntBASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 AL157884.1-201ENST00000424561 454 ntBASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 VN1R42P-201ENST00000424651 344 ntBASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 HMGB3P10-201ENST00000434734 572 ntBASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.7□□□□□ -1.5
TMIGD3P0DMS9 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms