Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RPL35AP19-201ENST00000469425 329 ntBASIC6.24□□□□□ -1.41
RB1P06400 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.24□□□□□ -1.41
RB1P06400 RN7SL826P-201ENST00000479724 288 ntBASIC6.24□□□□□ -1.41
RB1P06400 RPS3AP15-201ENST00000483874 781 ntBASIC6.24□□□□□ -1.41
RB1P06400 AC004815.1-201ENST00000484185 331 ntBASIC6.24□□□□□ -1.41
RB1P06400 CCDC11P1-201ENST00000503137 1162 ntBASIC6.24□□□□□ -1.41
RB1P06400 AC024558.1-201ENST00000505008 528 ntBASIC6.24□□□□□ -1.41
RB1P06400 TPM3P3-201ENST00000521343 354 ntBASIC6.24□□□□□ -1.41
RB1P06400 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.24□□□□□ -1.41
RB1P06400 AC078878.1-201ENST00000539832 958 ntBASIC6.24□□□□□ -1.41
RB1P06400 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.24□□□□□ -1.41
RB1P06400 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.24□□□□□ -1.41
RB1P06400 RBM22P12-201ENST00000567098 1255 ntBASIC6.24□□□□□ -1.41
RB1P06400 AC016911.1-201ENST00000613297 452 ntBASIC6.24□□□□□ -1.41
RB1P06400 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.24□□□□□ -1.41
RB1P06400 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.24□□□□□ -1.41
RB1P06400 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.24□□□□□ -1.41
RB1P06400 AC114786.1-201ENST00000512892 1415 ntBASIC6.24□□□□□ -1.41
RB1P06400 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RB1P06400 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.24□□□□□ -1.41
RB1P06400 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RB1P06400 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RB1P06400 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.23□□□□□ -1.41
RB1P06400 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RB1P06400 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RB1P06400 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.23□□□□□ -1.41
RB1P06400 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
RB1P06400 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RB1P06400 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.23□□□□□ -1.41
RB1P06400 Z95114.1-201ENST00000624264 14574 ntBASIC6.23□□□□□ -1.41
RB1P06400 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.23□□□□□ -1.41
RB1P06400 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.23□□□□□ -1.41
RB1P06400 NPM1P10-201ENST00000398310 865 ntBASIC6.23□□□□□ -1.41
RB1P06400 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.23□□□□□ -1.41
RB1P06400 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.23□□□□□ -1.41
RB1P06400 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.23□□□□□ -1.41
RB1P06400 CNOT7P2-201ENST00000441051 832 ntBASIC6.23□□□□□ -1.41
RB1P06400 CUBNP2-201ENST00000443534 1139 ntBASIC6.23□□□□□ -1.41
RB1P06400 RAD1P2-201ENST00000446414 663 ntBASIC6.23□□□□□ -1.41
RB1P06400 RN7SL172P-201ENST00000460535 303 ntBASIC6.23□□□□□ -1.41
RB1P06400 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.23□□□□□ -1.41
RB1P06400 AC021678.3-201ENST00000517893 476 ntBASIC6.23□□□□□ -1.41
RB1P06400 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.23□□□□□ -1.41
RB1P06400 IGLV3-30-201ENST00000524362 298 ntBASIC6.23□□□□□ -1.41
RB1P06400 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.23□□□□□ -1.41
RB1P06400 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.23□□□□□ -1.41
RB1P06400 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.23□□□□□ -1.41
RB1P06400 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.23□□□□□ -1.41
RB1P06400 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.23□□□□□ -1.41
RB1P06400 AC116651.1-201ENST00000609724 556 ntBASIC6.23□□□□□ -1.41
RB1P06400 AC005840.5-201ENST00000619166 599 ntBASIC6.23□□□□□ -1.41
RB1P06400 AL390318.1-201ENST00000624564 687 ntBASIC6.23□□□□□ -1.41
RB1P06400 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.23□□□□□ -1.41
RB1P06400 TTC41P-205ENST00000551270 3963 ntBASIC6.23□□□□□ -1.41
RB1P06400 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.23□□□□□ -1.41
RB1P06400 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RB1P06400 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.23□□□□□ -1.41
RB1P06400 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RB1P06400 SRRM1P3-201ENST00000426911 2678 ntBASIC6.22□□□□□ -1.41
RB1P06400 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.22□□□□□ -1.41
RB1P06400 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RB1P06400 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RB1P06400 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RB1P06400 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
RB1P06400 AC116158.1-201ENST00000560231 2129 ntBASIC6.22□□□□□ -1.41
RB1P06400 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.22□□□□□ -1.41
RB1P06400 RNA5SP319-201ENST00000362768 119 ntBASIC6.22□□□□□ -1.41
RB1P06400 RNA5SP514-201ENST00000363717 111 ntBASIC6.22□□□□□ -1.41
RB1P06400 RNA5SP131-201ENST00000365452 119 ntBASIC6.22□□□□□ -1.41
RB1P06400 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.22□□□□□ -1.41
RB1P06400 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.22□□□□□ -1.41
RB1P06400 RMRPP5-201ENST00000411156 267 ntBASIC6.22□□□□□ -1.41
RB1P06400 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.22□□□□□ -1.41
RB1P06400 SLC35E1P1-201ENST00000419313 864 ntBASIC6.22□□□□□ -1.41
RB1P06400 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RB1P06400 AL139148.1-201ENST00000427122 680 ntBASIC6.22□□□□□ -1.41
RB1P06400 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.22□□□□□ -1.41
RB1P06400 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.22□□□□□ -1.41
RB1P06400 XKRYP6-201ENST00000440468 1116 ntBASIC6.22□□□□□ -1.41
RB1P06400 XKRYP3-201ENST00000442113 1116 ntBASIC6.22□□□□□ -1.41
RB1P06400 EEF1B2P5-201ENST00000444820 548 ntBASIC6.22□□□□□ -1.41
RB1P06400 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
RB1P06400 AC104849.1-201ENST00000462623 405 ntBASIC6.22□□□□□ -1.41
RB1P06400 AC128716.1-201ENST00000475129 166 ntBASIC6.22□□□□□ -1.41
RB1P06400 AC087672.1-201ENST00000479876 766 ntBASIC6.22□□□□□ -1.41
RB1P06400 UBA52P7-201ENST00000486088 380 ntBASIC6.22□□□□□ -1.41
RB1P06400 AC009120.1-201ENST00000493458 473 ntBASIC6.22□□□□□ -1.41
RB1P06400 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RB1P06400 HIGD1AP14-201ENST00000507617 282 ntBASIC6.22□□□□□ -1.41
RB1P06400 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.22□□□□□ -1.41
RB1P06400 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.22□□□□□ -1.41
RB1P06400 NPM1P21-201ENST00000513394 762 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms