Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC011840.5-201ENST00000582125 771 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 MIR4260-201ENST00000583107 67 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 AC063977.5-201ENST00000601044 974 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 SAMMSON-209ENST00000641222 1100 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 ZNF402P-201ENST00000404435 3100 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.88□□□□□ -1.47
PDGFBP01127 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFBP01127 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFBP01127 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PDGFBP01127 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFBP01127 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFBP01127 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFBP01127 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PDGFBP01127 AC006213.6-201ENST00000623722 4179 ntBASIC5.88□□□□□ -1.47
PDGFBP01127 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFBP01127 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFBP01127 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.88□□□□□ -1.47
PDGFBP01127 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
PDGFBP01127 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
PDGFBP01127 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 AL033543.1-201ENST00000623440 13454 ntBASIC5.87□□□□□ -1.47
PDGFBP01127 AP000547.3-204ENST00000588548 2523 ntBASIC5.87□□□□□ -1.47
PDGFBP01127 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PDGFBP01127 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 AC005294.1-201ENST00000355509 281 ntBASIC5.87□□□□□ -1.47
PDGFBP01127 RN7SKP28-201ENST00000364770 305 ntBASIC5.87□□□□□ -1.47
PDGFBP01127 AL390774.1-201ENST00000411924 246 ntBASIC5.87□□□□□ -1.47
PDGFBP01127 AC099677.3-201ENST00000427081 395 ntBASIC5.87□□□□□ -1.47
PDGFBP01127 AL121578.1-201ENST00000428051 892 ntBASIC5.87□□□□□ -1.47
PDGFBP01127 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.87□□□□□ -1.47
PDGFBP01127 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.87□□□□□ -1.47
PDGFBP01127 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.87□□□□□ -1.47
PDGFBP01127 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.87□□□□□ -1.47
PDGFBP01127 AC083982.1-201ENST00000485679 344 ntBASIC5.87□□□□□ -1.47
PDGFBP01127 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.87□□□□□ -1.47
PDGFBP01127 AC139365.2-201ENST00000517972 253 ntBASIC5.87□□□□□ -1.47
PDGFBP01127 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.87□□□□□ -1.47
PDGFBP01127 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.87□□□□□ -1.47
PDGFBP01127 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.87□□□□□ -1.47
PDGFBP01127 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.87□□□□□ -1.47
PDGFBP01127 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.87□□□□□ -1.47
PDGFBP01127 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.87□□□□□ -1.47
PDGFBP01127 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.87□□□□□ -1.47
PDGFBP01127 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.87□□□□□ -1.47
PDGFBP01127 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.87□□□□□ -1.47
PDGFBP01127 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PDGFBP01127 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.87□□□□□ -1.47
PDGFBP01127 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PDGFBP01127 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.87□□□□□ -1.47
PDGFBP01127 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDGFBP01127 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PDGFBP01127 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PDGFBP01127 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFBP01127 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFBP01127 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
PDGFBP01127 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFBP01127 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFBP01127 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.86□□□□□ -1.47
PDGFBP01127 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFBP01127 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFBP01127 SNX18P3-202ENST00000565670 1750 ntBASIC5.86□□□□□ -1.47
PDGFBP01127 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.86□□□□□ -1.47
PDGFBP01127 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PDGFBP01127 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFBP01127 AC011503.2-201ENST00000594230 1500 ntBASIC5.86□□□□□ -1.47
PDGFBP01127 AC092111.2-201ENST00000611627 1414 ntBASIC5.86□□□□□ -1.47
PDGFBP01127 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PDGFBP01127 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFBP01127 TPT1P13-201ENST00000449760 499 ntBASIC5.86□□□□□ -1.47
PDGFBP01127 SDC4P-201ENST00000453285 601 ntBASIC5.86□□□□□ -1.47
PDGFBP01127 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.86□□□□□ -1.47
PDGFBP01127 RPS3AP15-201ENST00000483874 781 ntBASIC5.86□□□□□ -1.47
PDGFBP01127 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.86□□□□□ -1.47
PDGFBP01127 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFBP01127 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFBP01127 AC018552.1-201ENST00000562099 811 ntBASIC5.86□□□□□ -1.47
PDGFBP01127 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.86□□□□□ -1.47
PDGFBP01127 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.86□□□□□ -1.47
PDGFBP01127 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFBP01127 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFBP01127 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFBP01127 AL356752.1-201ENST00000615844 593 ntBASIC5.86□□□□□ -1.47
PDGFBP01127 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFBP01127 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFBP01127 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFBP01127 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PDGFBP01127 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms