Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.85□□□□□ -1.47
GPC4O75487 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.85□□□□□ -1.47
GPC4O75487 AC007956.1-201ENST00000555623 542 ntBASIC5.85□□□□□ -1.47
GPC4O75487 AC007346.2-201ENST00000564816 892 ntBASIC5.85□□□□□ -1.47
GPC4O75487 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.85□□□□□ -1.47
GPC4O75487 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.85□□□□□ -1.47
GPC4O75487 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.85□□□□□ -1.47
GPC4O75487 AC025857.2-201ENST00000602711 238 ntBASIC5.85□□□□□ -1.47
GPC4O75487 AL136131.3-201ENST00000607600 188 ntBASIC5.85□□□□□ -1.47
GPC4O75487 AC108673.3-201ENST00000609183 335 ntBASIC5.85□□□□□ -1.47
GPC4O75487 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GPC4O75487 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.85□□□□□ -1.47
GPC4O75487 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.85□□□□□ -1.47
GPC4O75487 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GPC4O75487 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
GPC4O75487 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GPC4O75487 AC130304.1-201ENST00000622942 2385 ntBASIC5.85□□□□□ -1.47
GPC4O75487 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.85□□□□□ -1.47
GPC4O75487 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GPC4O75487 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GPC4O75487 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
GPC4O75487 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.84□□□□□ -1.47
GPC4O75487 Z83820.1-201ENST00000456978 1499 ntBASIC5.84□□□□□ -1.47
GPC4O75487 IFIT1P1-201ENST00000400497 1449 ntBASIC5.84□□□□□ -1.47
GPC4O75487 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
GPC4O75487 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GPC4O75487 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.84□□□□□ -1.47
GPC4O75487 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
GPC4O75487 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.84□□□□□ -1.47
GPC4O75487 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.84□□□□□ -1.47
GPC4O75487 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.84□□□□□ -1.47
GPC4O75487 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GPC4O75487 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
GPC4O75487 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
GPC4O75487 RNU6-618P-201ENST00000363518 112 ntBASIC5.84□□□□□ -1.47
GPC4O75487 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.84□□□□□ -1.47
GPC4O75487 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
GPC4O75487 RAB5CP1-201ENST00000395972 580 ntBASIC5.84□□□□□ -1.47
GPC4O75487 AC007068.1-201ENST00000396690 844 ntBASIC5.84□□□□□ -1.47
GPC4O75487 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
GPC4O75487 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.84□□□□□ -1.47
GPC4O75487 AC019070.1-201ENST00000415008 1024 ntBASIC5.84□□□□□ -1.47
GPC4O75487 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.84□□□□□ -1.47
GPC4O75487 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.84□□□□□ -1.47
GPC4O75487 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.84□□□□□ -1.47
GPC4O75487 AC106901.1-201ENST00000425086 698 ntBASIC5.84□□□□□ -1.47
GPC4O75487 AC099677.3-201ENST00000427081 395 ntBASIC5.84□□□□□ -1.47
GPC4O75487 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.84□□□□□ -1.47
GPC4O75487 AC069154.1-201ENST00000432914 542 ntBASIC5.84□□□□□ -1.47
GPC4O75487 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.84□□□□□ -1.47
GPC4O75487 BMS1P10-201ENST00000443754 1120 ntBASIC5.84□□□□□ -1.47
GPC4O75487 OR52E7P-201ENST00000452394 933 ntBASIC5.84□□□□□ -1.47
GPC4O75487 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.84□□□□□ -1.47
GPC4O75487 AP002884.1-201ENST00000479691 655 ntBASIC5.84□□□□□ -1.47
GPC4O75487 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.84□□□□□ -1.47
GPC4O75487 AC008629.2-201ENST00000503783 483 ntBASIC5.84□□□□□ -1.47
GPC4O75487 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
GPC4O75487 AC097486.1-201ENST00000515331 210 ntBASIC5.84□□□□□ -1.47
GPC4O75487 RN7SKP238-201ENST00000516483 249 ntBASIC5.84□□□□□ -1.47
GPC4O75487 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.84□□□□□ -1.47
GPC4O75487 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
GPC4O75487 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.84□□□□□ -1.47
GPC4O75487 LINC00556-201ENST00000569603 412 ntBASIC5.84□□□□□ -1.47
GPC4O75487 TXNP4-201ENST00000575018 310 ntBASIC5.84□□□□□ -1.47
GPC4O75487 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.84□□□□□ -1.47
GPC4O75487 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.84□□□□□ -1.47
GPC4O75487 AC060780.2-201ENST00000589047 198 ntBASIC5.84□□□□□ -1.47
GPC4O75487 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.84□□□□□ -1.47
GPC4O75487 AP005131.7-201ENST00000610087 611 ntBASIC5.84□□□□□ -1.47
GPC4O75487 AC024884.1-201ENST00000620583 399 ntBASIC5.84□□□□□ -1.47
GPC4O75487 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
GPC4O75487 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
GPC4O75487 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GPC4O75487 CASC19-260ENST00000641828 2001 ntBASIC5.84□□□□□ -1.48
GPC4O75487 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
GPC4O75487 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GPC4O75487 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
GPC4O75487 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.83□□□□□ -1.48
GPC4O75487 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GPC4O75487 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GPC4O75487 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GPC4O75487 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GPC4O75487 SAMM50P1-201ENST00000455403 1399 ntBASIC5.83□□□□□ -1.48
GPC4O75487 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GPC4O75487 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GPC4O75487 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
GPC4O75487 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.83□□□□□ -1.48
GPC4O75487 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.83□□□□□ -1.48
GPC4O75487 SELENOWP1-201ENST00000322792 252 ntBASIC5.83□□□□□ -1.48
GPC4O75487 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.83□□□□□ -1.48
GPC4O75487 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.83□□□□□ -1.48
GPC4O75487 RNU6-152P-201ENST00000384037 107 ntBASIC5.83□□□□□ -1.48
GPC4O75487 SNRPEP6-201ENST00000407465 277 ntBASIC5.83□□□□□ -1.48
GPC4O75487 USP9YP19-201ENST00000412165 485 ntBASIC5.83□□□□□ -1.48
GPC4O75487 ARAFP1-201ENST00000422172 605 ntBASIC5.83□□□□□ -1.48
GPC4O75487 MTCO1P57-201ENST00000432182 261 ntBASIC5.83□□□□□ -1.48
GPC4O75487 RPS12P17-201ENST00000438591 377 ntBASIC5.83□□□□□ -1.48
GPC4O75487 VN1R110P-201ENST00000438988 971 ntBASIC5.83□□□□□ -1.48
GPC4O75487 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.83□□□□□ -1.48
GPC4O75487 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms