Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 RNU6-619P-201ENST00000365146 108 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 PHBP1-201ENST00000392260 808 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC025750.1-201ENST00000399891 379 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 PKMP3-201ENST00000405497 715 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 B3GALNT1P1-201ENST00000420569 975 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AL136231.1-201ENST00000429407 730 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AL513175.1-201ENST00000431492 780 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 ANKRD54P1-201ENST00000433115 471 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 CLUHP1-201ENST00000435012 1190 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AL512882.1-201ENST00000436086 832 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 CICP10-201ENST00000439497 198 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC093019.1-201ENST00000443135 252 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 PTMAP1-205ENST00000455552 325 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC008868.1-201ENST00000509786 737 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 RPL7L1P13-201ENST00000511702 739 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 LRRC34P2-201ENST00000514850 553 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 RNA5SP135-201ENST00000517019 125 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 IGLVI-70-201ENST00000523272 390 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC123904.3-201ENST00000547218 814 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC136618.2-201ENST00000575091 400 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 MIR3913-1-201ENST00000577744 102 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 MIR548Y-201ENST00000582739 110 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 KPNA2P3-201ENST00000584190 848 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 APOC2-202ENST00000585786 880 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 MARK3P1-201ENST00000604796 643 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC103974.2-201ENST00000611319 778 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 PART1_1.1-201ENST00000611761 217 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AL132796.3-201ENST00000624703 900 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AC024614.3-201ENST00000637860 256 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 CRYM-AS1-204ENST00000637983 556 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 PSMC1P7-201ENST00000495689 1315 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 AP002833.3-201ENST00000625075 2265 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
PCDHGA11Q9Y5H2 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AL034370.1-201ENST00000397254 1590 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AL590065.1-201ENST00000603371 4774 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 RNU6-433P-201ENST00000363216 104 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 RNU6-532P-201ENST00000384318 107 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AL035467.1-201ENST00000403583 686 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 GSTA9P-201ENST00000406231 611 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 RPSAP72-201ENST00000407020 358 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AC114814.2-201ENST00000419195 485 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 AC062016.2-201ENST00000420950 676 ntBASIC7.43□□□□□ -1.22
PCDHGA11Q9Y5H2 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms