Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 MTND5P10-201ENST00000603719 1809 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 EEF1A1P10-201ENST00000475365 1390 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 MAPK6PS2-201ENST00000379571 2060 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC091152.4-201ENST00000623480 3483 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 RNU6-831P-201ENST00000384548 107 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 Z93019.1-201ENST00000416450 973 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 BNIP3P2-201ENST00000441221 577 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AL035666.1-201ENST00000446195 348 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC092570.2-201ENST00000452117 1143 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC007547.1-201ENST00000462177 490 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC090589.1-201ENST00000473109 362 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC073522.1-201ENST00000483312 377 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 IGHVII-78-1-201ENST00000521105 269 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC022861.1-201ENST00000522981 663 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 ARL6IP1P3-201ENST00000524544 560 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 APOOP3-201ENST00000536787 586 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 DCN-210ENST00000547568 823 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 VWA3A-205ENST00000563755 861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC073534.1-201ENST00000598671 1056 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AL390058.1-201ENST00000603834 629 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AC106782.6-201ENST00000611264 512 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 uc_338.15-201ENST00000615470 191 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 AL132796.3-201ENST00000624703 900 ntBASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.27□□□□□ -1.09
VPS9D1Q9Y2B5 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 AC010680.2-201ENST00000603521 2117 ntBASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 HRH4-201ENST00000256906 3668 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 OR2D3-201ENST00000317834 1070 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 OR56A4-201ENST00000330728 1209 ntBASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 KRTAP11-1-201ENST00000332378 912 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
VPS9D1Q9Y2B5 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms