Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CDC42P3-201ENST00000518493 633 ntBASIC5.4□□□□□ -1.54
CCDC88CQ9P219 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 AC022404.1-201ENST00000555320 273 ntBASIC5.4□□□□□ -1.54
CCDC88CQ9P219 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 AC025857.2-201ENST00000602711 238 ntBASIC5.4□□□□□ -1.54
CCDC88CQ9P219 AL589674.2-201ENST00000604304 337 ntBASIC5.4□□□□□ -1.54
CCDC88CQ9P219 AL512624.1-201ENST00000613638 469 ntBASIC5.4□□□□□ -1.54
CCDC88CQ9P219 MIR6133-201ENST00000617057 108 ntBASIC5.4□□□□□ -1.54
CCDC88CQ9P219 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 HSPD1P7-201ENST00000447985 1686 ntBASIC5.4□□□□□ -1.54
CCDC88CQ9P219 LINC02019-201ENST00000608605 2060 ntBASIC5.4□□□□□ -1.54
CCDC88CQ9P219 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC88CQ9P219 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 AC007998.4-201ENST00000612496 2533 ntBASIC5.4□□□□□ -1.55
CCDC88CQ9P219 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 Z95331.1-201ENST00000623075 23112 ntBASIC5.4□□□□□ -1.55
CCDC88CQ9P219 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 OR10R3P-201ENST00000361688 942 ntBASIC5.4□□□□□ -1.55
CCDC88CQ9P219 RNA5SP211-201ENST00000365516 117 ntBASIC5.4□□□□□ -1.55
CCDC88CQ9P219 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 MRPL53P1-201ENST00000414323 319 ntBASIC5.4□□□□□ -1.55
CCDC88CQ9P219 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 DEFA9P-201ENST00000433042 285 ntBASIC5.4□□□□□ -1.55
CCDC88CQ9P219 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 AC007386.1-201ENST00000455212 582 ntBASIC5.4□□□□□ -1.55
CCDC88CQ9P219 RPS21P4-201ENST00000487122 248 ntBASIC5.4□□□□□ -1.55
CCDC88CQ9P219 RNA5SP92-201ENST00000516437 110 ntBASIC5.4□□□□□ -1.55
CCDC88CQ9P219 AC027308.1-201ENST00000517993 110 ntBASIC5.4□□□□□ -1.55
CCDC88CQ9P219 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC88CQ9P219 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 RNA5SP132-201ENST00000364725 118 ntBASIC5.39□□□□□ -1.55
CCDC88CQ9P219 MIR143-201ENST00000385300 106 ntBASIC5.39□□□□□ -1.55
CCDC88CQ9P219 AC007161.1-204ENST00000423039 460 ntBASIC5.39□□□□□ -1.55
CCDC88CQ9P219 AC005033.1-201ENST00000428904 813 ntBASIC5.39□□□□□ -1.55
CCDC88CQ9P219 NPM1P19-201ENST00000450070 712 ntBASIC5.39□□□□□ -1.55
CCDC88CQ9P219 MEMO1P4-201ENST00000453590 386 ntBASIC5.39□□□□□ -1.55
CCDC88CQ9P219 RN7SL72P-201ENST00000460697 269 ntBASIC5.39□□□□□ -1.55
CCDC88CQ9P219 RN7SL222P-201ENST00000476452 299 ntBASIC5.39□□□□□ -1.55
CCDC88CQ9P219 PFN1P6-201ENST00000476786 399 ntBASIC5.39□□□□□ -1.55
CCDC88CQ9P219 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC88CQ9P219 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 AL159987.1-201ENST00000347911 293 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 U3.10-201ENST00000364459 214 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 NME1P1-201ENST00000420914 382 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 EIF3LP3-201ENST00000495197 822 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 FO393422.1-201ENST00000603908 708 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 AC093388.1-201ENST00000609166 430 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 AC140134.1-201ENST00000511830 3544 ntBASIC5.38□□□□□ -1.55
CCDC88CQ9P219 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC88CQ9P219 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms