Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM54Q9BYV2 AC007603.3-201ENST00000636915 979 ntBASIC6.12□□□□□ -1.43
TRIM54Q9BYV2 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM54Q9BYV2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM54Q9BYV2 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM54Q9BYV2 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AC096921.2-201ENST00000561507 1916 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 CASC19-246ENST00000641625 1606 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 RN7SKP28-201ENST00000364770 305 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AC234772.1-201ENST00000377927 937 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 PSMA6P1-201ENST00000400275 741 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AL121835.1-201ENST00000404250 354 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 OSTCP4-201ENST00000424397 449 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 MTCO2P23-201ENST00000425216 680 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 BX679664.2-201ENST00000439282 283 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AL157827.1-201ENST00000447622 132 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 CEACAMP11-201ENST00000455211 583 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AC004890.1-201ENST00000461005 181 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 CBX1P5-201ENST00000475330 559 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 RPL21P47-201ENST00000483696 477 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 SNRPCP11-201ENST00000492453 205 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AC008427.1-201ENST00000503102 655 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 MRPL57P6-201ENST00000506570 309 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AC096571.1-202ENST00000506634 735 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AC069306.1-201ENST00000507006 843 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 SNORA74.1-201ENST00000516320 180 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 HAUS1P3-201ENST00000523909 662 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AP003080.1-202ENST00000526526 915 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 MIR3189-201ENST00000578735 73 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 RN7SL475P-201ENST00000583379 298 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AL589765.6-201ENST00000601909 549 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AC011891.2-201ENST00000604949 397 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 RNU6-84P-201ENST00000607737 102 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AL138693.1-201ENST00000622219 129 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AC003992.1-201ENST00000635364 557 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 AP001541.1-201ENST00000623322 1904 ntBASIC6.11□□□□□ -1.43
TRIM54Q9BYV2 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 RNU6-252P-201ENST00000363232 107 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 SNORA64.3-201ENST00000365647 134 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 RNU6-796P-201ENST00000391086 107 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 RPL22P22-201ENST00000395439 379 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 RN7SKP144-201ENST00000411108 279 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 AC096533.1-201ENST00000411645 353 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 DHFRP2-201ENST00000414224 547 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 IGLV3-4-201ENST00000432300 244 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 PPIAP10-201ENST00000438675 458 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 RRM2P4-201ENST00000441721 562 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 RPS27P5-201ENST00000444247 244 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 RPS7P10-201ENST00000464254 603 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms