Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 MFSD8-218ENST00000641186 4448 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 OR7E11P-202ENST00000642027 1491 ntBASIC2.65□□□□□ -1.99
KRTAP4-3Q9BYR4 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AC093311.1-201ENST00000506586 2021 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AL162456.1-201ENST00000634535 2006 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 CPEB1-AS1-202ENST00000618020 2994 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AL445250.1-203ENST00000641829 1535 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 OR10J6P-201ENST00000289731 930 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 Y_RNA.60-201ENST00000362831 98 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 RN7SKP257-201ENST00000364525 309 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 SNORA30B-201ENST00000365319 129 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 Y_RNA.353-201ENST00000365440 108 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 RNU6-297P-201ENST00000384636 107 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 RNY3P10-201ENST00000384764 102 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 Y_RNA.577-201ENST00000384794 101 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 MIR431-201ENST00000385266 114 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 MIR106B-201ENST00000385301 82 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 RNU6-1168P-201ENST00000390831 104 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 RNU6-1275P-201ENST00000391087 107 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AL021331.1-201ENST00000402817 582 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AL592114.1-201ENST00000403842 483 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 RN7SKP236-201ENST00000410635 284 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 RN7SKP205-201ENST00000410999 307 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 RPL12P10-201ENST00000413498 498 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AC004986.1-201ENST00000414855 607 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 GEMIN2P2-201ENST00000418195 715 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 EEF1A1P34-201ENST00000419888 1267 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AL671986.1-201ENST00000422197 955 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AL590135.1-201ENST00000422215 156 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 EIF4A1P2-201ENST00000422633 1220 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 CYCSP46-201ENST00000423569 204 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 NANOGP4-201ENST00000427230 913 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 EIF4A1P10-201ENST00000428832 1216 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 DDX11L10-201ENST00000430178 571 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 VDAC2P3-201ENST00000430995 828 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AL513175.1-201ENST00000431492 780 ntBASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC2.64□□□□□ -1.99
KRTAP4-3Q9BYR4 AC000362.1-201ENST00000433725 425 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms