Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC040958.1-201ENST00000561102 201 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC012511.1-201ENST00000608140 449 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC073389.3-201ENST00000609434 935 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AL139407.1-201ENST00000613826 1175 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC010325.3-201ENST00000641084 394 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 PCAT14-202ENST00000627127 3935 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC079097.1-201ENST00000512187 1399 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AC023141.3-201ENST00000436698 278 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AC245291.3-201ENST00000443400 292 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 NXT1P1-201ENST00000458481 316 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 RN7SL188P-201ENST00000469842 285 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AP002453.1-201ENST00000492327 668 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 SLC25A51P2-201ENST00000535708 889 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AL390334.1-201ENST00000556395 450 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AGGF1P7-201ENST00000562369 913 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 MRPS21P8-201ENST00000569196 235 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AC012368.3-201ENST00000604190 219 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AL591222.2-201ENST00000604443 754 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AL161912.3-201ENST00000605404 628 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AL136131.3-201ENST00000607600 188 ntBASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC28BQ9BUN5 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AL359643.1-201ENST00000404109 423 ntBASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 NANOGP9-201ENST00000439890 892 ntBASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AC073465.2-201ENST00000440938 498 ntBASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 GEMIN2P1-201ENST00000454246 752 ntBASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 HMGN1P16-201ENST00000508308 283 ntBASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 RN7SKP253-201ENST00000516424 309 ntBASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms