Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CMSS1Q9BQ75 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
CMSS1Q9BQ75 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AC008627.1-201ENST00000517511 1704 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AL121886.1-201ENST00000358609 435 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 U3.7-201ENST00000363668 216 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 MIR551B-201ENST00000384984 96 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 OOSP1-201ENST00000398992 1270 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 NPM1P40-201ENST00000412758 733 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AL035422.1-201ENST00000414193 397 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AL133482.1-201ENST00000415988 498 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 HYALP1-201ENST00000417674 1279 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AC108479.1-201ENST00000431142 427 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 TUBB4BP6-201ENST00000437576 479 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AL359265.1-201ENST00000440296 795 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 EIF5AP4-201ENST00000441206 465 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 RPS19P6-201ENST00000441327 433 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 LINC02210-201ENST00000444561 288 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 DUTP1-201ENST00000493631 470 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 GAPDHP71-201ENST00000511530 1003 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AC092332.1-201ENST00000563684 829 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 RN7SL230P-201ENST00000580835 303 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 MIR4472-2-201ENST00000582069 67 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AC068768.2-201ENST00000602352 343 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 WBP1LP12-201ENST00000604449 331 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AC099654.11-201ENST00000638857 294 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 Z95331.1-201ENST00000623075 23112 ntBASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CMSS1Q9BQ75 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 PSG10P-201ENST00000501199 1500 ntBASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 OR4F13P-202ENST00000560066 2054 ntBASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 U3.28-201ENST00000391249 210 ntBASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 AC096921.1-201ENST00000411661 375 ntBASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 GPS2P1-201ENST00000411761 986 ntBASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 RPS14P4-201ENST00000415880 418 ntBASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 HMGB1P7-201ENST00000450921 612 ntBASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 PSAT1P4-201ENST00000466500 526 ntBASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 RN7SL362P-201ENST00000494228 267 ntBASIC4.82□□□□□ -1.64
CMSS1Q9BQ75 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms