Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 CENPIP1-201ENST00000425713 902 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 AC006946.1-201ENST00000429106 328 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 CR383656.1-201ENST00000484916 377 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 SCARNA9-201ENST00000530422 353 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 AC004817.4-201ENST00000602396 3625 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 AC013268.3-201ENST00000262716 2324 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 OR52B5P-204ENST00000641744 3467 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 AC003973.3-201ENST00000624863 2822 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 ITPK1-AS1-201ENST00000553639 4701 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 RPL12P34-201ENST00000424532 479 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 RPL34P20-201ENST00000442771 351 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 AURKAPS2-201ENST00000454983 333 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 SLC25A14P1-201ENST00000502867 901 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 AC125494.2-201ENST00000602431 657 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 MALAT1-202ENST00000534336 8708 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 LRRC37A4P-202ENST00000581296 5372 ntBASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CSMD1Q96PZ7 AC130304.1-201ENST00000622942 2385 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 NUDT19P3-201ENST00000404698 555 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AC006130.2-201ENST00000586202 326 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AC009597.2-201ENST00000604659 592 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AP000350.7-201ENST00000624923 8030 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AL022319.1-201ENST00000458183 1167 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AC069366.1-201ENST00000583159 838 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AC006338.2-201ENST00000616864 791 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AC011944.2-201ENST00000624440 683 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 PCDHA10-203ENST00000562220 12358 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 GJA6P-201ENST00000415117 1042 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 AC114876.1-201ENST00000490962 1366 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 RN7SKP99-201ENST00000517028 307 ntBASIC4.55□□□□□ -1.68
CSMD1Q96PZ7 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms