Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 NPIPB14P-203ENST00000532298 987 ntBASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 AP005136.2-201ENST00000583253 1049 ntBASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 AP001823.1-201ENST00000604056 1003 ntBASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 RPL21P136-201ENST00000605378 396 ntBASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 AC119674.1-212ENST00000641155 993 ntBASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 SAMMSON-209ENST00000641222 1100 ntBASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 AC007159.1-201ENST00000566529 4706 ntBASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 AC016583.1-201ENST00000624221 2431 ntBASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
LINC00346Q8IVM7 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 FBXL21-201ENST00000297158 1305 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AC022325.1-201ENST00000502748 2199 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 OR10R3P-201ENST00000361688 942 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 RNU4-31P-201ENST00000384211 141 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 SNORA77.2-201ENST00000408571 112 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AC019205.1-201ENST00000421830 730 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 CYCSP11-201ENST00000436426 315 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 ZNF619P1-201ENST00000446539 752 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AL035551.1-201ENST00000446931 348 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AC097359.1-201ENST00000447946 463 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 RPL23AP60-201ENST00000450011 454 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 RN7SL552P-201ENST00000462094 276 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 RPL29P23-201ENST00000486188 442 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 RPL12P30-201ENST00000488389 499 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 NACAP5-201ENST00000509863 636 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AL512310.9-201ENST00000553311 948 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 MTND4LP25-201ENST00000570218 163 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AC145207.9-201ENST00000623802 325 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 AC010325.3-201ENST00000641084 394 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 ZNF90P1-201ENST00000480493 1951 ntBASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LINC00346Q8IVM7 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
LINC00346Q8IVM7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
LINC00346Q8IVM7 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.34□□□□□ -1.56
LINC00346Q8IVM7 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.34□□□□□ -1.56
LINC00346Q8IVM7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 AC239868.2-201ENST00000564237 4527 ntBASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 RNU6-249P-201ENST00000363016 102 ntBASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00346Q8IVM7 AL132875.1-201ENST00000403623 949 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms