Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AC093012.1-202ENST00000549403 582 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AL121821.2-201ENST00000556081 394 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 PCMTD1P2-201ENST00000565017 355 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 MIR3913-1-201ENST00000577744 102 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AC015917.1-201ENST00000579654 510 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AC005518.2-201ENST00000603254 282 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AL590282.1-201ENST00000610379 1136 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AC005962.2-201ENST00000611427 652 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AC143336.1-201ENST00000614164 836 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AC116165.3-201ENST00000614524 400 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 MIR8089-201ENST00000620165 82 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AC073488.8-201ENST00000631952 757 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AL034408.1-201ENST00000637712 664 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AL669831.5-218ENST00000591702 1873 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 AL034417.4-202ENST00000642135 2236 ntBASIC7.59□□□□□ -1.19
LYSMD3Q7Z3D4 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
LYSMD3Q7Z3D4 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
LYSMD3Q7Z3D4 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 CCT4P2-201ENST00000233836 1548 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 RNU6-501P-201ENST00000364072 100 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 Y_RNA.311-201ENST00000365068 96 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AIMP1P1-201ENST00000418670 937 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 SNX18P14-201ENST00000429308 574 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AL645936.2-201ENST00000430565 928 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 PDSS1P2-201ENST00000449397 678 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 RNU7-157P-201ENST00000459600 66 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AC016687.1-201ENST00000482574 353 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AC084871.2-201ENST00000503355 464 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 KCTD9P6-201ENST00000522306 950 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 HPRT1P3-201ENST00000539521 576 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 PSMB7P1-201ENST00000556349 514 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 HMGB1P33-201ENST00000563485 527 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AC135050.6-202ENST00000613584 392 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AC040896.1-201ENST00000613819 479 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AL391903.2-201ENST00000614532 247 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AL122125.1-201ENST00000616999 600 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AL353898.2-201ENST00000623000 255 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AP003119.3-201ENST00000566747 4192 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AC093225.1-201ENST00000506867 1408 ntBASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.58□□□□□ -1.2
LYSMD3Q7Z3D4 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms