Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC104162.1-201ENST00000430831 2382 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 MTND4P10-201ENST00000446199 1363 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CLRN1P58418 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLRN1P58418 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.81□□□□□ -1.48
CLRN1P58418 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLRN1P58418 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLRN1P58418 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.81□□□□□ -1.48
CLRN1P58418 AC061975.7-201ENST00000592016 2692 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 RNA5SP140-201ENST00000364524 92 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CLRN1P58418 AC245036.1-201ENST00000391727 309 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CLRN1P58418 CDC42P6-201ENST00000421246 576 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 RPL23AP85-201ENST00000421838 433 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 AL589794.1-201ENST00000424971 390 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 AC021876.1-201ENST00000425959 359 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 ETF1P3-201ENST00000430422 1160 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 AC073143.1-201ENST00000436316 395 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 AL008629.1-201ENST00000438615 184 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.81□□□□□ -1.48
CLRN1P58418 OR51B8P-201ENST00000449892 769 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 VN1R38P-201ENST00000450265 887 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.81□□□□□ -1.48
CLRN1P58418 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.81□□□□□ -1.48
CLRN1P58418 RPS20P4-201ENST00000461659 355 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLRN1P58418 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.81□□□□□ -1.48
CLRN1P58418 AC018639.1-201ENST00000492994 442 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 AC022206.1-201ENST00000495947 347 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 AC023050.1-201ENST00000498198 304 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLRN1P58418 NPM1P27-201ENST00000502784 830 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.81□□□□□ -1.48
CLRN1P58418 AC131392.1-201ENST00000506490 633 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.81□□□□□ -1.48
CLRN1P58418 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.81□□□□□ -1.48
CLRN1P58418 MRPS33P3-201ENST00000513456 322 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.81□□□□□ -1.48
CLRN1P58418 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLRN1P58418 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.81□□□□□ -1.48
CLRN1P58418 IGHV1-14-201ENST00000523391 241 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.81□□□□□ -1.48
CLRN1P58418 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.81□□□□□ -1.48
CLRN1P58418 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.81□□□□□ -1.48
CLRN1P58418 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.81□□□□□ -1.48
CLRN1P58418 AP005136.1-201ENST00000579765 429 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.81□□□□□ -1.48
CLRN1P58418 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.81□□□□□ -1.48
CLRN1P58418 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.81□□□□□ -1.48
CLRN1P58418 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.81□□□□□ -1.48
CLRN1P58418 AC091193.1-201ENST00000604640 448 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.81□□□□□ -1.48
CLRN1P58418 AC011939.3-201ENST00000613686 466 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 AC012254.5-201ENST00000623573 478 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.81□□□□□ -1.48
CLRN1P58418 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.81□□□□□ -1.48
CLRN1P58418 AC073488.9-201ENST00000631601 754 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.81□□□□□ -1.48
CLRN1P58418 AL391261.1-201ENST00000555712 1479 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 AL390862.1-201ENST00000635467 1469 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLRN1P58418 AL731556.1-201ENST00000394628 3711 ntBASIC5.81□□□□□ -1.48
CLRN1P58418 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLRN1P58418 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLRN1P58418 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.81□□□□□ -1.48
CLRN1P58418 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC5.81□□□□□ -1.48
CLRN1P58418 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLRN1P58418 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLRN1P58418 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLRN1P58418 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLRN1P58418 AC017007.4-201ENST00000503353 1352 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 MTCO1P28-201ENST00000574177 1528 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CLRN1P58418 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 PPIAP24-201ENST00000328558 471 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 ATP5HP3-201ENST00000396994 486 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLRN1P58418 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.8□□□□□ -1.48
CLRN1P58418 AC010385.1-201ENST00000412374 256 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 BTF3P8-201ENST00000414577 526 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 RPS7P9-201ENST00000414704 586 ntBASIC5.8□□□□□ -1.48
CLRN1P58418 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.8□□□□□ -1.48
CLRN1P58418 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms