Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CLTCL1P53675 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.83□□□□□ -1.16
CLTCL1P53675 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CLTCL1P53675 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CLTCL1P53675 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.82□□□□□ -1.16
CLTCL1P53675 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.82□□□□□ -1.16
CLTCL1P53675 GNAS-202ENST00000306090 477 ntTSL 5 BASIC7.82□□□□□ -1.16
CLTCL1P53675 RN7SKP115-201ENST00000363177 317 ntBASIC7.82□□□□□ -1.16
CLTCL1P53675 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CLTCL1P53675 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CLTCL1P53675 RN7SKP126-201ENST00000411143 300 ntBASIC7.82□□□□□ -1.16
CLTCL1P53675 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CLTCL1P53675 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC7.82□□□□□ -1.16
CLTCL1P53675 AC104634.1-201ENST00000452720 462 ntBASIC7.82□□□□□ -1.16
CLTCL1P53675 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC7.82□□□□□ -1.16
CLTCL1P53675 SNRPCP2-201ENST00000504370 475 ntBASIC7.82□□□□□ -1.16
CLTCL1P53675 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CLTCL1P53675 NPM1P42-201ENST00000560329 862 ntBASIC7.82□□□□□ -1.16
CLTCL1P53675 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC7.82□□□□□ -1.16
CLTCL1P53675 RN7SL356P-201ENST00000582228 248 ntBASIC7.82□□□□□ -1.16
CLTCL1P53675 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC7.82□□□□□ -1.16
CLTCL1P53675 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.82□□□□□ -1.16
CLTCL1P53675 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CLTCL1P53675 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CLTCL1P53675 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CLTCL1P53675 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
CLTCL1P53675 AL078621.3-201ENST00000623707 2042 ntBASIC7.82□□□□□ -1.16
CLTCL1P53675 PANDAR-201ENST00000629595 1506 ntBASIC7.82□□□□□ -1.16
CLTCL1P53675 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CLTCL1P53675 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.82□□□□□ -1.16
CLTCL1P53675 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC7.82□□□□□ -1.16
CLTCL1P53675 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.82□□□□□ -1.16
CLTCL1P53675 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.82□□□□□ -1.16
CLTCL1P53675 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC7.82□□□□□ -1.16
CLTCL1P53675 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CLTCL1P53675 HSPA8P18-201ENST00000439846 1928 ntBASIC7.82□□□□□ -1.16
CLTCL1P53675 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CLTCL1P53675 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
CLTCL1P53675 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
CLTCL1P53675 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CLTCL1P53675 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.81□□□□□ -1.16
CLTCL1P53675 PA2G4P6-201ENST00000438325 1197 ntBASIC7.81□□□□□ -1.16
CLTCL1P53675 AL451063.1-201ENST00000450164 1133 ntBASIC7.81□□□□□ -1.16
CLTCL1P53675 ST13P12-201ENST00000508958 1094 ntBASIC7.81□□□□□ -1.16
CLTCL1P53675 OR5AZ1P-201ENST00000527448 943 ntBASIC7.81□□□□□ -1.16
CLTCL1P53675 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC7.81□□□□□ -1.16
CLTCL1P53675 MTCO1P1-201ENST00000624263 1081 ntBASIC7.81□□□□□ -1.16
CLTCL1P53675 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
CLTCL1P53675 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CLTCL1P53675 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CLTCL1P53675 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.81□□□□□ -1.16
CLTCL1P53675 AC007114.2-201ENST00000576014 4281 ntBASIC7.81□□□□□ -1.16
CLTCL1P53675 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CLTCL1P53675 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CLTCL1P53675 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CLTCL1P53675 OR4F13P-202ENST00000560066 2054 ntBASIC7.81□□□□□ -1.16
CLTCL1P53675 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
CLTCL1P53675 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.81□□□□□ -1.16
CLTCL1P53675 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
CLTCL1P53675 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CLTCL1P53675 AL009179.1-201ENST00000406085 265 ntBASIC7.81□□□□□ -1.16
CLTCL1P53675 RNU6ATAC21P-201ENST00000408656 126 ntBASIC7.81□□□□□ -1.16
CLTCL1P53675 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.81□□□□□ -1.16
CLTCL1P53675 OR10T1P-201ENST00000424327 947 ntBASIC7.81□□□□□ -1.16
CLTCL1P53675 VN1R54P-201ENST00000435210 1049 ntBASIC7.81□□□□□ -1.16
CLTCL1P53675 RPL37AP8-201ENST00000494116 276 ntBASIC7.81□□□□□ -1.16
CLTCL1P53675 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC7.81□□□□□ -1.16
CLTCL1P53675 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.81□□□□□ -1.16
CLTCL1P53675 AC009237.13-201ENST00000603193 276 ntBASIC7.81□□□□□ -1.16
CLTCL1P53675 AP002799.1-201ENST00000623552 423 ntBASIC7.81□□□□□ -1.16
CLTCL1P53675 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CLTCL1P53675 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CLTCL1P53675 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
CLTCL1P53675 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
CLTCL1P53675 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CLTCL1P53675 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.8□□□□□ -1.16
CLTCL1P53675 RNU4-4P-201ENST00000364588 130 ntBASIC7.8□□□□□ -1.16
CLTCL1P53675 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.8□□□□□ -1.16
CLTCL1P53675 SCARNA16.4-201ENST00000516956 187 ntBASIC7.8□□□□□ -1.16
CLTCL1P53675 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC7.8□□□□□ -1.16
CLTCL1P53675 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC7.8□□□□□ -1.16
CLTCL1P53675 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.8□□□□□ -1.16
CLTCL1P53675 H3F3BP2-201ENST00000583907 357 ntBASIC7.8□□□□□ -1.16
CLTCL1P53675 AC009163.6-201ENST00000612367 342 ntBASIC7.8□□□□□ -1.16
CLTCL1P53675 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
CLTCL1P53675 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLTCL1P53675 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
CLTCL1P53675 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.8□□□□□ -1.16
CLTCL1P53675 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CLTCL1P53675 SNURFL-201ENST00000309296 343 ntBASIC7.79□□□□□ -1.16
CLTCL1P53675 AL645733.1-201ENST00000402250 217 ntBASIC7.79□□□□□ -1.16
CLTCL1P53675 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7.79□□□□□ -1.16
CLTCL1P53675 RBMY2KP-201ENST00000418221 992 ntBASIC7.79□□□□□ -1.16
CLTCL1P53675 FABP7P2-201ENST00000429946 379 ntBASIC7.79□□□□□ -1.16
CLTCL1P53675 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.79□□□□□ -1.16
CLTCL1P53675 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC7.79□□□□□ -1.16
CLTCL1P53675 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC7.79□□□□□ -1.16
CLTCL1P53675 RPS23P9-201ENST00000448848 438 ntBASIC7.79□□□□□ -1.16
CLTCL1P53675 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CLTCL1P53675 AC058823.1-201ENST00000485315 474 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms