Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
COPAP53621 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
COPAP53621 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
COPAP53621 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
COPAP53621 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COPAP53621 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPAP53621 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
COPAP53621 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
COPAP53621 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPAP53621 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.32□□□□□ -1.4
COPAP53621 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
COPAP53621 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.32□□□□□ -1.4
COPAP53621 GCNT6-201ENST00000379591 934 ntBASIC6.32□□□□□ -1.4
COPAP53621 RNU6-925P-201ENST00000384629 104 ntBASIC6.32□□□□□ -1.4
COPAP53621 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPAP53621 HMGN1P20-201ENST00000411849 300 ntBASIC6.32□□□□□ -1.4
COPAP53621 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.32□□□□□ -1.4
COPAP53621 AC130360.1-201ENST00000425489 1117 ntBASIC6.32□□□□□ -1.4
COPAP53621 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.32□□□□□ -1.4
COPAP53621 ARAFP2-201ENST00000440565 559 ntBASIC6.32□□□□□ -1.4
COPAP53621 ATP5LP2-201ENST00000440646 311 ntBASIC6.32□□□□□ -1.4
COPAP53621 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.32□□□□□ -1.4
COPAP53621 AC006326.1-201ENST00000445465 787 ntBASIC6.32□□□□□ -1.4
COPAP53621 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.32□□□□□ -1.4
COPAP53621 RN7SL221P-201ENST00000466190 281 ntBASIC6.32□□□□□ -1.4
COPAP53621 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COPAP53621 AC098847.1-201ENST00000473094 348 ntBASIC6.32□□□□□ -1.4
COPAP53621 MTATP6P9-201ENST00000515039 680 ntBASIC6.32□□□□□ -1.4
COPAP53621 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.32□□□□□ -1.4
COPAP53621 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.32□□□□□ -1.4
COPAP53621 IGKV3D-34-201ENST00000522638 302 ntBASIC6.32□□□□□ -1.4
COPAP53621 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.32□□□□□ -1.4
COPAP53621 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.32□□□□□ -1.4
COPAP53621 AC130365.2-201ENST00000525882 1201 ntBASIC6.32□□□□□ -1.4
COPAP53621 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.32□□□□□ -1.4
COPAP53621 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.32□□□□□ -1.4
COPAP53621 AL121579.2-201ENST00000555466 590 ntBASIC6.32□□□□□ -1.4
COPAP53621 HNRNPCP1-201ENST00000556181 766 ntBASIC6.32□□□□□ -1.4
COPAP53621 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.32□□□□□ -1.4
COPAP53621 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.32□□□□□ -1.4
COPAP53621 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.32□□□□□ -1.4
COPAP53621 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.32□□□□□ -1.4
COPAP53621 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.32□□□□□ -1.4
COPAP53621 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.32□□□□□ -1.4
COPAP53621 AC135178.6-201ENST00000605314 398 ntBASIC6.32□□□□□ -1.4
COPAP53621 AC018645.2-201ENST00000609151 472 ntBASIC6.32□□□□□ -1.4
COPAP53621 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.32□□□□□ -1.4
COPAP53621 AC016957.2-201ENST00000616998 848 ntBASIC6.32□□□□□ -1.4
COPAP53621 MIR7159-201ENST00000620587 66 ntBASIC6.32□□□□□ -1.4
COPAP53621 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.32□□□□□ -1.4
COPAP53621 AL132640.3-201ENST00000630473 177 ntBASIC6.32□□□□□ -1.4
COPAP53621 AC008691.1-209ENST00000642094 814 ntBASIC6.32□□□□□ -1.4
COPAP53621 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COPAP53621 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPAP53621 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPAP53621 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
COPAP53621 AC119674.1-202ENST00000641333 1860 ntBASIC6.32□□□□□ -1.4
COPAP53621 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.32□□□□□ -1.4
COPAP53621 AC005725.1-201ENST00000577346 2607 ntBASIC6.31□□□□□ -1.4
COPAP53621 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COPAP53621 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COPAP53621 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.31□□□□□ -1.4
COPAP53621 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.31□□□□□ -1.4
COPAP53621 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
COPAP53621 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.31□□□□□ -1.4
COPAP53621 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COPAP53621 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COPAP53621 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
COPAP53621 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COPAP53621 SNORA21-201ENST00000362423 132 ntBASIC6.31□□□□□ -1.4
COPAP53621 RNA5SP435-201ENST00000364044 108 ntBASIC6.31□□□□□ -1.4
COPAP53621 MIR620-201ENST00000385232 95 ntBASIC6.31□□□□□ -1.4
COPAP53621 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
COPAP53621 U3.43-201ENST00000410734 213 ntBASIC6.31□□□□□ -1.4
COPAP53621 MTCO1P51-201ENST00000427672 1060 ntBASIC6.31□□□□□ -1.4
COPAP53621 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.31□□□□□ -1.4
COPAP53621 ELOCP3-201ENST00000439303 348 ntBASIC6.31□□□□□ -1.4
COPAP53621 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.31□□□□□ -1.4
COPAP53621 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.31□□□□□ -1.4
COPAP53621 AC002553.3-201ENST00000453002 341 ntBASIC6.31□□□□□ -1.4
COPAP53621 EIF2S2P5-201ENST00000457635 968 ntBASIC6.31□□□□□ -1.4
COPAP53621 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.31□□□□□ -1.4
COPAP53621 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COPAP53621 AC015864.1-201ENST00000496512 544 ntBASIC6.31□□□□□ -1.4
COPAP53621 AC119751.4-201ENST00000507498 357 ntBASIC6.31□□□□□ -1.4
COPAP53621 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.31□□□□□ -1.4
COPAP53621 RNU6-1102P-201ENST00000516149 96 ntBASIC6.31□□□□□ -1.4
COPAP53621 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.31□□□□□ -1.4
COPAP53621 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.31□□□□□ -1.4
COPAP53621 HMGB1P46-201ENST00000520062 610 ntBASIC6.31□□□□□ -1.4
COPAP53621 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.31□□□□□ -1.4
COPAP53621 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.31□□□□□ -1.4
COPAP53621 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.31□□□□□ -1.4
COPAP53621 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.31□□□□□ -1.4
COPAP53621 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.31□□□□□ -1.4
COPAP53621 AP001858.2-201ENST00000536213 601 ntBASIC6.31□□□□□ -1.4
COPAP53621 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.31□□□□□ -1.4
COPAP53621 AP000619.2-201ENST00000546014 969 ntBASIC6.31□□□□□ -1.4
COPAP53621 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.31□□□□□ -1.4
COPAP53621 OR4H6P-201ENST00000563771 921 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms