Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AL731532.1-201ENST00000623972 4236 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TRIM23P36406 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM23P36406 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM23P36406 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM23P36406 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TRIM23P36406 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TRIM23P36406 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM23P36406 SNORA64.1-201ENST00000362600 132 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 SNORD1C-201ENST00000363315 78 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 RNU1-59P-201ENST00000364829 162 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 RN7SKP286-201ENST00000410894 299 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM23P36406 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM23P36406 AL365220.1-201ENST00000432923 399 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 HMGB3P24-201ENST00000433260 622 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 AC096775.1-201ENST00000437724 448 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 AC002504.1-201ENST00000438281 691 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 AC015983.1-201ENST00000441577 373 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM23P36406 OR2AF1P-201ENST00000454899 889 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM23P36406 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM23P36406 RN7SL174P-201ENST00000475578 289 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 RN7SL717P-201ENST00000478343 297 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 AC022215.1-201ENST00000481770 362 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM23P36406 AC009120.1-201ENST00000493458 473 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM23P36406 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM23P36406 SCARNA6.1-201ENST00000516989 238 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 AC021678.3-201ENST00000517893 476 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 AC027544.3-201ENST00000535082 757 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM23P36406 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM23P36406 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM23P36406 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM23P36406 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TRIM23P36406 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM23P36406 U1.25-201ENST00000614085 162 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 U1.34-201ENST00000618578 162 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 U1.31-201ENST00000620022 160 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM23P36406 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
TRIM23P36406 AC099654.6-201ENST00000636487 512 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 AC087565.3-203ENST00000641018 837 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM23P36406 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM23P36406 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM23P36406 AC019072.1-201ENST00000604535 1551 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM23P36406 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM23P36406 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM23P36406 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TRIM23P36406 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM23P36406 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM23P36406 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM23P36406 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM23P36406 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM23P36406 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM23P36406 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TRIM23P36406 AC117409.1-201ENST00000470499 1310 ntBASIC5.74□□□□□ -1.49
TRIM23P36406 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM23P36406 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM23P36406 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM23P36406 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM23P36406 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM23P36406 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
TRIM23P36406 CDY11P-201ENST00000447168 1651 ntBASIC5.73□□□□□ -1.49
TRIM23P36406 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM23P36406 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM23P36406 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TRIM23P36406 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM23P36406 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM23P36406 MIR323A-201ENST00000362199 86 ntBASIC5.73□□□□□ -1.49
TRIM23P36406 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRIM23P36406 AL662874.1-201ENST00000426065 230 ntBASIC5.73□□□□□ -1.49
TRIM23P36406 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM23P36406 VTI1BP4-201ENST00000427516 527 ntBASIC5.73□□□□□ -1.49
TRIM23P36406 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM23P36406 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM23P36406 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM23P36406 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM23P36406 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRIM23P36406 GAPDHP48-201ENST00000436626 961 ntBASIC5.73□□□□□ -1.49
TRIM23P36406 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM23P36406 RNU1-88P-201ENST00000459274 128 ntBASIC5.73□□□□□ -1.49
TRIM23P36406 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
TRIM23P36406 RPSAP37-201ENST00000470913 821 ntBASIC5.73□□□□□ -1.49
TRIM23P36406 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM23P36406 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
TRIM23P36406 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM23P36406 AC074255.1-201ENST00000511259 501 ntBASIC5.73□□□□□ -1.49
TRIM23P36406 AC074087.1-201ENST00000512059 724 ntBASIC5.73□□□□□ -1.49
TRIM23P36406 AC139365.2-201ENST00000517972 253 ntBASIC5.73□□□□□ -1.49
TRIM23P36406 AC112191.2-201ENST00000522428 333 ntBASIC5.73□□□□□ -1.49
TRIM23P36406 HMGB1P42-201ENST00000532126 553 ntBASIC5.73□□□□□ -1.49
TRIM23P36406 AL121594.2-201ENST00000541658 472 ntBASIC5.73□□□□□ -1.49
TRIM23P36406 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms