Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC9.32□□□□□ -0.92
CFTRP13569 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
CFTRP13569 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CFTRP13569 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
CFTRP13569 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
CFTRP13569 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CFTRP13569 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
CFTRP13569 AC083899.1-201ENST00000454465 3819 ntBASIC9.32□□□□□ -0.92
CFTRP13569 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CFTRP13569 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CFTRP13569 AC008124.1-201ENST00000609803 9730 ntBASIC9.32□□□□□ -0.92
CFTRP13569 AC006511.3-201ENST00000624929 1783 ntBASIC9.32□□□□□ -0.92
CFTRP13569 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CFTRP13569 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CFTRP13569 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
CFTRP13569 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC9.32□□□□□ -0.92
CFTRP13569 U3.3-201ENST00000362986 216 ntBASIC9.32□□□□□ -0.92
CFTRP13569 RNA5SP505-201ENST00000364748 108 ntBASIC9.32□□□□□ -0.92
CFTRP13569 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC9.32□□□□□ -0.92
CFTRP13569 AC073410.1-201ENST00000435125 589 ntBASIC9.32□□□□□ -0.92
CFTRP13569 AC079080.1-201ENST00000479841 822 ntBASIC9.32□□□□□ -0.92
CFTRP13569 RPS17P5-201ENST00000498293 408 ntBASIC9.32□□□□□ -0.92
CFTRP13569 ST13P12-201ENST00000508958 1094 ntBASIC9.32□□□□□ -0.92
CFTRP13569 YWHABP2-201ENST00000540201 713 ntBASIC9.32□□□□□ -0.92
CFTRP13569 H3F3BP2-201ENST00000583907 357 ntBASIC9.32□□□□□ -0.92
CFTRP13569 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC9.32□□□□□ -0.92
CFTRP13569 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CFTRP13569 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
CFTRP13569 AC006206.1-201ENST00000544842 3387 ntBASIC9.32□□□□□ -0.92
CFTRP13569 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CFTRP13569 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
CFTRP13569 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC9.32□□□□□ -0.92
CFTRP13569 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
CFTRP13569 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CFTRP13569 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CFTRP13569 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
CFTRP13569 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC9.31□□□□□ -0.92
CFTRP13569 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
CFTRP13569 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC9.31□□□□□ -0.92
CFTRP13569 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CFTRP13569 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
CFTRP13569 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
CFTRP13569 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CFTRP13569 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC9.31□□□□□ -0.92
CFTRP13569 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
CFTRP13569 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC9.31□□□□□ -0.92
CFTRP13569 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC9.31□□□□□ -0.92
CFTRP13569 AC073072.2-201ENST00000447425 348 ntBASIC9.31□□□□□ -0.92
CFTRP13569 MEMO1P4-201ENST00000453590 386 ntBASIC9.31□□□□□ -0.92
CFTRP13569 ATP5LP5-201ENST00000483050 299 ntBASIC9.31□□□□□ -0.92
CFTRP13569 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC9.31□□□□□ -0.92
CFTRP13569 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC9.31□□□□□ -0.92
CFTRP13569 OR7H2P-201ENST00000513483 306 ntBASIC9.31□□□□□ -0.92
CFTRP13569 AC074050.1-201ENST00000563247 211 ntBASIC9.31□□□□□ -0.92
CFTRP13569 MIR6780A-201ENST00000615089 68 ntBASIC9.31□□□□□ -0.92
CFTRP13569 LRRC37A9P-201ENST00000603850 5376 ntBASIC9.31□□□□□ -0.92
CFTRP13569 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC9.31□□□□□ -0.92
CFTRP13569 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CFTRP13569 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CFTRP13569 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC9.31□□□□□ -0.92
CFTRP13569 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CFTRP13569 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
CFTRP13569 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
CFTRP13569 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC9.3□□□□□ -0.92
CFTRP13569 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CFTRP13569 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CFTRP13569 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
CFTRP13569 AC092905.1-201ENST00000467527 949 ntBASIC9.3□□□□□ -0.92
CFTRP13569 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC9.3□□□□□ -0.92
CFTRP13569 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
CFTRP13569 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC9.3□□□□□ -0.92
CFTRP13569 EDDM3DP-201ENST00000554692 434 ntBASIC9.3□□□□□ -0.92
CFTRP13569 AC015660.5-201ENST00000623238 564 ntBASIC9.3□□□□□ -0.92
CFTRP13569 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CFTRP13569 AC013268.3-201ENST00000262716 2324 ntBASIC9.3□□□□□ -0.92
CFTRP13569 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
CFTRP13569 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
CFTRP13569 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
CFTRP13569 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CFTRP13569 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
CFTRP13569 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC9.3□□□□□ -0.92
CFTRP13569 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
CFTRP13569 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC9.3□□□□□ -0.92
CFTRP13569 DPY19L1P1-201ENST00000417811 2594 ntBASIC9.3□□□□□ -0.92
CFTRP13569 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CFTRP13569 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CFTRP13569 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC9.29□□□□□ -0.92
CFTRP13569 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CFTRP13569 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC9.29□□□□□ -0.92
CFTRP13569 AC079741.1-201ENST00000321498 212 ntBASIC9.29□□□□□ -0.92
CFTRP13569 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC9.29□□□□□ -0.92
CFTRP13569 FABP5P2-201ENST00000439042 408 ntBASIC9.29□□□□□ -0.92
CFTRP13569 AP005403.1-201ENST00000579720 229 ntBASIC9.29□□□□□ -0.92
CFTRP13569 AL161616.1-201ENST00000611867 286 ntBASIC9.29□□□□□ -0.92
CFTRP13569 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
CFTRP13569 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC9.29□□□□□ -0.92
CFTRP13569 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC9.29□□□□□ -0.92
CFTRP13569 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CFTRP13569 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CFTRP13569 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms