Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.5□□□□□ -1.69
CD28P10747 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.5□□□□□ -1.69
CD28P10747 AC012075.1-201ENST00000436549 580 ntBASIC4.5□□□□□ -1.69
CD28P10747 FRG2FP-204ENST00000453982 852 ntBASIC4.5□□□□□ -1.69
CD28P10747 AL133445.1-201ENST00000467051 452 ntBASIC4.5□□□□□ -1.69
CD28P10747 RPL38P3-201ENST00000484463 213 ntBASIC4.5□□□□□ -1.69
CD28P10747 RN7SL184P-201ENST00000488308 297 ntBASIC4.5□□□□□ -1.69
CD28P10747 AC108693.1-201ENST00000496068 432 ntBASIC4.5□□□□□ -1.69
CD28P10747 AC008638.1-201ENST00000506035 866 ntBASIC4.5□□□□□ -1.69
CD28P10747 MIR2117-201ENST00000516780 80 ntBASIC4.5□□□□□ -1.69
CD28P10747 AC021678.3-201ENST00000517893 476 ntBASIC4.5□□□□□ -1.69
CD28P10747 AC139365.2-201ENST00000517972 253 ntBASIC4.5□□□□□ -1.69
CD28P10747 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.5□□□□□ -1.69
CD28P10747 MRPS16P1-201ENST00000523462 412 ntBASIC4.5□□□□□ -1.69
CD28P10747 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.5□□□□□ -1.69
CD28P10747 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.5□□□□□ -1.69
CD28P10747 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.5□□□□□ -1.69
CD28P10747 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.5□□□□□ -1.69
CD28P10747 MIR1273E-201ENST00000581165 102 ntBASIC4.5□□□□□ -1.69
CD28P10747 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.5□□□□□ -1.69
CD28P10747 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.5□□□□□ -1.69
CD28P10747 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.5□□□□□ -1.69
CD28P10747 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.5□□□□□ -1.69
CD28P10747 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CD28P10747 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CD28P10747 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.5□□□□□ -1.69
CD28P10747 GTF2IP4-201ENST00000453092 2054 ntBASIC4.5□□□□□ -1.69
CD28P10747 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CD28P10747 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.5□□□□□ -1.69
CD28P10747 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
CD28P10747 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 AL049634.1-201ENST00000453770 1720 ntBASIC4.49□□□□□ -1.69
CD28P10747 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 LINC02019-201ENST00000608605 2060 ntBASIC4.49□□□□□ -1.69
CD28P10747 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 AC090220.1-201ENST00000593078 1699 ntBASIC4.49□□□□□ -1.69
CD28P10747 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.49□□□□□ -1.69
CD28P10747 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
CD28P10747 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CD28P10747 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.49□□□□□ -1.69
CD28P10747 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CD28P10747 OR9K1P-201ENST00000326513 941 ntBASIC4.49□□□□□ -1.69
CD28P10747 AL159987.1-201ENST00000347911 293 ntBASIC4.49□□□□□ -1.69
CD28P10747 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.49□□□□□ -1.69
CD28P10747 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CD28P10747 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.49□□□□□ -1.69
CD28P10747 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.49□□□□□ -1.69
CD28P10747 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.49□□□□□ -1.69
CD28P10747 AC016027.5-201ENST00000427227 210 ntBASIC4.49□□□□□ -1.69
CD28P10747 AL390879.1-201ENST00000439143 386 ntBASIC4.49□□□□□ -1.69
CD28P10747 AL390119.1-201ENST00000440329 312 ntBASIC4.49□□□□□ -1.69
CD28P10747 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.49□□□□□ -1.69
CD28P10747 RNU1-88P-201ENST00000459274 128 ntBASIC4.49□□□□□ -1.69
CD28P10747 AC026348.1-201ENST00000462549 1053 ntBASIC4.49□□□□□ -1.69
CD28P10747 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.49□□□□□ -1.69
CD28P10747 PPP1R11P1-201ENST00000486095 376 ntBASIC4.49□□□□□ -1.69
CD28P10747 CYP4F27P-201ENST00000514557 494 ntBASIC4.49□□□□□ -1.69
CD28P10747 BX510359.5-201ENST00000515651 304 ntBASIC4.49□□□□□ -1.69
CD28P10747 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.49□□□□□ -1.69
CD28P10747 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.49□□□□□ -1.69
CD28P10747 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.49□□□□□ -1.69
CD28P10747 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.49□□□□□ -1.69
CD28P10747 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
CD28P10747 AC090651.1-201ENST00000567865 634 ntBASIC4.49□□□□□ -1.69
CD28P10747 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
CD28P10747 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.49□□□□□ -1.69
CD28P10747 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.49□□□□□ -1.69
CD28P10747 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.49□□□□□ -1.69
CD28P10747 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.49□□□□□ -1.69
CD28P10747 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.49□□□□□ -1.69
CD28P10747 AC021766.1-201ENST00000624404 741 ntBASIC4.49□□□□□ -1.69
CD28P10747 AC007683.2-201ENST00000624681 714 ntBASIC4.49□□□□□ -1.69
CD28P10747 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 Z95114.1-201ENST00000624264 14574 ntBASIC4.49□□□□□ -1.69
CD28P10747 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 BCORP1-203ENST00000513194 5093 ntBASIC4.49□□□□□ -1.69
CD28P10747 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.49□□□□□ -1.69
CD28P10747 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 AP004607.3-201ENST00000530354 3915 ntBASIC4.49□□□□□ -1.69
CD28P10747 MFSD8-219ENST00000641228 2559 ntBASIC4.49□□□□□ -1.69
CD28P10747 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CD28P10747 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CD28P10747 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD28P10747 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD28P10747 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD28P10747 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD28P10747 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.48□□□□□ -1.69
CD28P10747 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.48□□□□□ -1.69
CD28P10747 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CD28P10747 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.48□□□□□ -1.69
CD28P10747 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms