Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 AC138517.1-201ENST00000515724 568 ntBASIC10.48□□□□□ -0.73
CHGAP10645 IGHVIII-26-1-201ENST00000520387 250 ntBASIC10.48□□□□□ -0.73
CHGAP10645 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC10.48□□□□□ -0.73
CHGAP10645 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC10.48□□□□□ -0.73
CHGAP10645 SDHCP4-201ENST00000532834 510 ntBASIC10.48□□□□□ -0.73
CHGAP10645 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.73
CHGAP10645 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
CHGAP10645 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC10.48□□□□□ -0.73
CHGAP10645 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC10.48□□□□□ -0.73
CHGAP10645 RBM4-213ENST00000578778 582 ntTSL 4 BASIC10.48□□□□□ -0.73
CHGAP10645 RN7SL667P-201ENST00000582817 298 ntBASIC10.48□□□□□ -0.73
CHGAP10645 MYLK-221ENST00000583087 678 ntTSL 4 BASIC10.48□□□□□ -0.73
CHGAP10645 GLUD1P2-201ENST00000583339 201 ntBASIC10.48□□□□□ -0.73
CHGAP10645 GLUD1P8-201ENST00000585063 203 ntBASIC10.48□□□□□ -0.73
CHGAP10645 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC10.48□□□□□ -0.73
CHGAP10645 SNX29P2-204ENST00000603801 875 ntBASIC10.48□□□□□ -0.73
CHGAP10645 AL161729.2-201ENST00000605700 456 ntBASIC10.48□□□□□ -0.73
CHGAP10645 AC097381.3-201ENST00000608962 462 ntBASIC10.48□□□□□ -0.73
CHGAP10645 AL136221.1-201ENST00000621449 509 ntBASIC10.48□□□□□ -0.73
CHGAP10645 AC008626.2-201ENST00000624425 248 ntBASIC10.48□□□□□ -0.73
CHGAP10645 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC10.48□□□□□ -0.73
CHGAP10645 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CHGAP10645 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHGAP10645 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC10.48□□□□□ -0.73
CHGAP10645 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHGAP10645 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHGAP10645 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHGAP10645 CAP1P2-201ENST00000417455 1409 ntBASIC10.48□□□□□ -0.73
CHGAP10645 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHGAP10645 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CHGAP10645 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHGAP10645 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CHGAP10645 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC10.48□□□□□ -0.73
CHGAP10645 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHGAP10645 PABPC1P9-201ENST00000426076 1612 ntBASIC10.47□□□□□ -0.73
CHGAP10645 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHGAP10645 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC10.47□□□□□ -0.73
CHGAP10645 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CHGAP10645 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHGAP10645 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC10.47□□□□□ -0.73
CHGAP10645 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CHGAP10645 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CHGAP10645 ENSAP3-201ENST00000312710 333 ntBASIC10.47□□□□□ -0.73
CHGAP10645 RNA5SP472-201ENST00000363868 119 ntBASIC10.47□□□□□ -0.73
CHGAP10645 RNU6-575P-201ENST00000411326 105 ntBASIC10.47□□□□□ -0.73
CHGAP10645 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC10.47□□□□□ -0.73
CHGAP10645 AL593856.1-201ENST00000419949 805 ntBASIC10.47□□□□□ -0.73
CHGAP10645 PTP4A1P1-201ENST00000420539 515 ntBASIC10.47□□□□□ -0.73
CHGAP10645 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC10.47□□□□□ -0.73
CHGAP10645 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC10.47□□□□□ -0.73
CHGAP10645 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC10.47□□□□□ -0.73
CHGAP10645 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC10.47□□□□□ -0.73
CHGAP10645 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC10.47□□□□□ -0.73
CHGAP10645 AC009518.3-201ENST00000438972 253 ntBASIC10.47□□□□□ -0.73
CHGAP10645 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC10.47□□□□□ -0.73
CHGAP10645 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC10.47□□□□□ -0.73
CHGAP10645 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC10.47□□□□□ -0.73
CHGAP10645 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CHGAP10645 RN7SL502P-201ENST00000481857 290 ntBASIC10.47□□□□□ -0.73
CHGAP10645 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC10.47□□□□□ -0.73
CHGAP10645 ARL4AP2-201ENST00000507378 601 ntBASIC10.47□□□□□ -0.73
CHGAP10645 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC10.47□□□□□ -0.73
CHGAP10645 RNU6-875P-201ENST00000516488 106 ntBASIC10.47□□□□□ -0.73
CHGAP10645 RN7SKP233-201ENST00000517005 110 ntBASIC10.47□□□□□ -0.73
CHGAP10645 CASC11-203ENST00000519071 791 ntTSL 3 BASIC10.47□□□□□ -0.73
CHGAP10645 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC10.47□□□□□ -0.73
CHGAP10645 OXR1-212ENST00000521592 993 ntTSL 5 BASIC10.47□□□□□ -0.73
CHGAP10645 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHGAP10645 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC10.47□□□□□ -0.73
CHGAP10645 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC10.47□□□□□ -0.73
CHGAP10645 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC10.47□□□□□ -0.73
CHGAP10645 GTF2IP22-201ENST00000554443 182 ntBASIC10.47□□□□□ -0.73
CHGAP10645 HNRNPA1P71-201ENST00000559135 950 ntBASIC10.47□□□□□ -0.73
CHGAP10645 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC10.47□□□□□ -0.73
CHGAP10645 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC10.47□□□□□ -0.73
CHGAP10645 PLEKHA3P1-201ENST00000598554 894 ntBASIC10.47□□□□□ -0.73
CHGAP10645 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC10.47□□□□□ -0.73
CHGAP10645 SEPT7P9-203ENST00000604116 343 ntBASIC10.47□□□□□ -0.73
CHGAP10645 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC10.47□□□□□ -0.73
CHGAP10645 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHGAP10645 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC10.47□□□□□ -0.73
CHGAP10645 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CHGAP10645 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC10.47□□□□□ -0.73
CHGAP10645 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC10.47□□□□□ -0.73
CHGAP10645 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CHGAP10645 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC10.47□□□□□ -0.73
CHGAP10645 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
CHGAP10645 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC10.46□□□□□ -0.73
CHGAP10645 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CHGAP10645 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC10.46□□□□□ -0.73
CHGAP10645 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CHGAP10645 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CHGAP10645 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CHGAP10645 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CHGAP10645 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CHGAP10645 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CHGAP10645 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CHGAP10645 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CHGAP10645 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
CHGAP10645 RNU6-660P-201ENST00000364566 109 ntBASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms